Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | F8B64_RS00280 | Genome accession | NZ_CP044497 |
| Coordinates | 57110..57622 (-) | Length | 170 a.a. |
| NCBI ID | WP_005651545.1 | Uniprot ID | A0A0H3PJN2 |
| Organism | Haemophilus influenzae strain PittGG | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52110..62622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F8B64_RS00265 (F8B64_00265) | comQ | 55416..55703 (-) | 288 | WP_012055313.1 | DUF5374 domain-containing protein | Machinery gene |
| F8B64_RS00270 (F8B64_00270) | comP | 55696..56379 (-) | 684 | WP_012055312.1 | DUF2572 family protein | Machinery gene |
| F8B64_RS00275 (F8B64_00275) | comO | 56394..57110 (-) | 717 | WP_012055311.1 | type II secretion system protein J | Machinery gene |
| F8B64_RS00280 (F8B64_00280) | comN | 57110..57622 (-) | 513 | WP_005651545.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| F8B64_RS00285 (F8B64_00285) | suhB | 57822..58625 (+) | 804 | WP_012055310.1 | inositol-1-monophosphatase | - |
| F8B64_RS00290 (F8B64_00290) | nrfE | 58733..60640 (+) | 1908 | WP_012055309.1 | heme lyase NrfEFG subunit NrfE | - |
| F8B64_RS00295 (F8B64_00295) | - | 60637..61167 (+) | 531 | WP_041174822.1 | DsbE family thiol:disulfide interchange protein | - |
| F8B64_RS00300 (F8B64_00300) | nrfF | 61164..62317 (+) | 1154 | Protein_57 | heme lyase NrfEFG subunit NrfF | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19877.15 Da Isoelectric Point: 8.9743
>NTDB_id=390493 F8B64_RS00280 WP_005651545.1 57110..57622(-) (comN) [Haemophilus influenzae strain PittGG]
MQKGMTLVELLIGLAIISIVLNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGMTLVELLIGLAIISIVLNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=390493 F8B64_RS00280 WP_005651545.1 57110..57622(-) (comN) [Haemophilus influenzae strain PittGG]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGTGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAACCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGTGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAACCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
98.824 |
100 |
0.988 |