Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FSA40_RS07030 Genome accession   NZ_CP044493
Coordinates   1421732..1422535 (-) Length   267 a.a.
NCBI ID   WP_002279972.1    Uniprot ID   -
Organism   Streptococcus mutans strain MD     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1416732..1427535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA40_RS07020 (FSA40_1412) smc 1417394..1420930 (-) 3537 WP_151416377.1 chromosome segregation protein SMC -
  FSA40_RS07025 (FSA40_1413) rnc 1420930..1421625 (-) 696 WP_002266141.1 ribonuclease III -
  FSA40_RS07030 (FSA40_1414) vicX 1421732..1422535 (-) 804 WP_002279972.1 MBL fold metallo-hydrolase Regulator
  FSA40_RS07035 (FSA40_1415) vicK 1422532..1423884 (-) 1353 WP_151416378.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FSA40_RS07040 (FSA40_1416) vicR 1423877..1424584 (-) 708 WP_002262930.1 response regulator YycF Regulator
  FSA40_RS07045 (FSA40_1417) - 1424937..1425719 (+) 783 WP_002262931.1 amino acid ABC transporter ATP-binding protein -
  FSA40_RS07050 (FSA40_1418) - 1425716..1426528 (+) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  FSA40_RS07055 (FSA40_1419) - 1426546..1427250 (+) 705 WP_002264823.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29723.79 Da        Isoelectric Point: 6.1184

>NTDB_id=390375 FSA40_RS07030 WP_002279972.1 1421732..1422535(-) (vicX) [Streptococcus mutans strain MD]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDSMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVLLTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=390375 FSA40_RS07030 WP_002279972.1 1421732..1422535(-) (vicX) [Streptococcus mutans strain MD]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATAGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTCTTATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

99.251

100

0.993

Multiple sequence alignment