Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FSA31_RS09270 Genome accession   NZ_CP044492
Coordinates   1845666..1846379 (+) Length   237 a.a.
NCBI ID   WP_002284914.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1840666..1851379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS10070 - 1841447..1841779 (-) 333 Protein_1730 lipase -
  FSA31_RS09260 (FSA31_1831) treC 1841871..1843499 (-) 1629 WP_002284913.1 alpha,alpha-phosphotrehalase -
  FSA31_RS09265 (FSA31_1832) treP 1843525..1845492 (-) 1968 WP_002269412.1 PTS system trehalose-specific EIIBC component -
  FSA31_RS09270 (FSA31_1833) treR 1845666..1846379 (+) 714 WP_002284914.1 trehalose operon repressor Regulator
  FSA31_RS09275 (FSA31_1834) - 1846644..1847849 (-) 1206 WP_002284915.1 abortive infection system toxin AbiGii family protein -
  FSA31_RS09280 (FSA31_1835) abiGI 1847850..1848746 (-) 897 WP_002284916.1 abortive phage resistance protein AbiGI -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27804.13 Da        Isoelectric Point: 9.7426

>NTDB_id=390335 FSA31_RS09270 WP_002284914.1 1845666..1846379(+) (treR) [Streptococcus mutans strain T8]
MKKYEIIFKKLEEDILKGHYHMGDYLPPEMELSQTYASSRDTVRKALQLLTKAGFIKTVQGRGSQIIKRERINFPVSQLT
SYQELVKQLQMNVKTNVIAIDKLIIDEKLTKLTGFENKGLVWRITRQRVIDGVASILDTDYLDKALIPHMTREIAEHSIY
DYLENQLKLDIAYAQKIITIDQVSQKDKILLDLDSENHVVSVKSKVYLSNQQQFQFTESRHKLEKFRFVDFARRHRD

Nucleotide


Download         Length: 714 bp        

>NTDB_id=390335 FSA31_RS09270 WP_002284914.1 1845666..1846379(+) (treR) [Streptococcus mutans strain T8]
ATGAAAAAATATGAAATTATTTTTAAAAAACTAGAAGAAGATATTCTCAAAGGACACTATCACATGGGTGACTATCTTCC
CCCTGAAATGGAACTTAGCCAGACCTATGCCAGCAGCCGAGATACTGTTAGAAAGGCTTTACAGCTCTTGACTAAGGCAG
GTTTTATTAAAACAGTACAGGGAAGAGGATCCCAAATTATCAAGCGTGAACGCATTAACTTTCCTGTCTCTCAACTAACC
AGCTATCAAGAATTGGTTAAACAATTGCAGATGAATGTCAAGACAAATGTTATTGCTATTGATAAACTGATTATTGATGA
GAAACTCACCAAACTAACCGGTTTTGAAAATAAAGGTCTTGTCTGGCGCATCACAAGACAGCGCGTAATAGACGGCGTTG
CTTCCATTTTAGATACGGATTATTTGGATAAAGCATTGATTCCTCATATGACCAGAGAAATCGCTGAACATTCTATCTAT
GATTATCTTGAAAATCAACTTAAGCTGGACATTGCCTATGCTCAAAAGATTATTACCATAGATCAAGTATCGCAAAAAGA
TAAAATTTTGCTTGATTTGGATTCTGAAAATCATGTCGTTTCGGTTAAATCTAAAGTTTATCTCAGTAATCAGCAGCAAT
TTCAATTCACTGAAAGCCGGCACAAACTGGAAAAGTTCCGTTTTGTTGACTTTGCCAGACGGCATCGTGATTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(4-65)

UTRA domain (UTRA)

(90-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

99.156

100

0.992

Multiple sequence alignment