Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   FSA31_RS06310 Genome accession   NZ_CP044492
Coordinates   1276896..1277789 (+) Length   297 a.a.
NCBI ID   WP_002284599.1    Uniprot ID   A0A0H5AVQ8
Organism   Streptococcus mutans strain T8     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1271896..1282789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS10095 (FSA31_1247) - 1273859..1273987 (-) 129 WP_002262718.1 hypothetical protein -
  FSA31_RS10065 - 1274022..1274252 (-) 231 WP_002282891.1 hypothetical protein -
  FSA31_RS06300 (FSA31_1248) - 1274382..1276133 (-) 1752 WP_002264334.1 GbpC/Spa domain-containing protein -
  FSA31_RS06305 (FSA31_1249) - 1276296..1276580 (-) 285 WP_002262720.1 helix-turn-helix transcriptional regulator -
  FSA31_RS06310 (FSA31_1250) irvR 1276896..1277789 (+) 894 WP_002284599.1 LexA family transcriptional regulator IrvR Regulator
  FSA31_RS06315 (FSA31_1251) - 1278250..1279137 (-) 888 WP_002284600.1 NAD(P)H-dependent oxidoreductase -
  FSA31_RS06320 (FSA31_1252) - 1279245..1280123 (-) 879 WP_002264921.1 helix-turn-helix transcriptional regulator -
  FSA31_RS06325 (FSA31_1253) - 1280248..1281738 (+) 1491 WP_002284601.1 FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 297 a.a.        Molecular weight: 33680.40 Da        Isoelectric Point: 6.7036

>NTDB_id=390302 FSA31_RS06310 WP_002284599.1 1276896..1277789(+) (irvR) [Streptococcus mutans strain T8]
MGRGKLTPQDLEAMKAISVNLQRLLAESGMKQSHLATILNIPTSSLNEYVKGKSLPKIGNIQKIADYFGLQKSDIDPRFA
SKKDSSTLDKINHIAKQLEMKRQIKVLDFCYQQSKEQDETANLSASDETTDDKVADKSNHTQYQKVVDSFIAKELNDQTI
IHWDNVIKAKDLYQTFGRQYENIQIYGEVSAGTGIWVGHEKQETIKYPIPIPEHDIALTVNGNSMEPLFYNGDVIFVKKT
KAIHHGQIIVVIVNNEAYVKKLYRKNKEIRLISLNPDYDDIILKEDDTIEVIGTVIT

Nucleotide


Download         Length: 894 bp        

>NTDB_id=390302 FSA31_RS06310 WP_002284599.1 1276896..1277789(+) (irvR) [Streptococcus mutans strain T8]
ATGGGACGCGGTAAATTAACTCCACAAGATTTAGAAGCAATGAAGGCTATTTCTGTCAATCTTCAAAGACTTCTAGCTGA
GAGCGGAATGAAACAATCTCACTTAGCCACTATTCTTAACATTCCTACAAGTAGTCTTAATGAATATGTTAAAGGAAAGA
GTTTGCCAAAAATAGGGAATATTCAAAAAATCGCAGATTACTTTGGTCTCCAAAAATCCGATATTGACCCTAGATTTGCA
AGTAAAAAGGACTCTTCTACTCTTGATAAAATTAATCATATTGCCAAACAATTAGAAATGAAGAGACAGATAAAAGTCTT
AGATTTCTGTTACCAACAATCAAAAGAACAAGATGAAACAGCAAACTTATCTGCCAGTGATGAAACGACTGATGATAAAG
TTGCTGACAAATCAAATCATACGCAGTATCAAAAGGTTGTTGATTCTTTTATTGCCAAAGAATTAAACGATCAGACAATT
ATTCATTGGGATAATGTGATAAAAGCTAAGGATTTGTATCAAACCTTTGGACGTCAATACGAAAACATTCAGATTTATGG
TGAAGTTTCAGCTGGTACTGGTATCTGGGTTGGACATGAAAAACAAGAAACCATTAAATACCCAATACCAATTCCAGAAC
ATGATATTGCTCTTACTGTCAATGGTAATAGTATGGAACCTTTATTTTACAACGGTGACGTTATTTTTGTTAAAAAGACT
AAAGCTATCCATCACGGACAAATTATCGTTGTTATTGTAAATAATGAGGCATATGTCAAAAAACTCTACCGAAAAAACAA
AGAAATTCGACTCATCTCATTAAATCCAGATTATGATGACATCATTTTAAAAGAAGATGATACAATTGAAGTCATCGGAA
CGGTCATTACCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(22-70)

Peptidase S24-like (Peptidase_S24)

(184-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H5AVQ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

98.653

100

0.987

Multiple sequence alignment