Detailed information NTG0039030

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RIEAN_RS04175
• Genome accession: NC_014738
• Coordinates: 903925..905028 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer ATCC 11845 = DSM 15868
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 898925..910028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIEAN_RS10370	-	899892..900032 (+)	141	WP_015345427.1	hypothetical protein	-
RIEAN_RS04150 (Riean_0823)	comF	900120..900773 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
RIEAN_RS04160 (Riean_0824)	-	900995..901546 (-)	552	WP_004918080.1	hypothetical protein	-
RIEAN_RS04165 (Riean_0825)	-	901601..902251 (-)	651	WP_004918082.1	HD domain-containing protein	-
RIEAN_RS04170 (Riean_0826)	gdhA	902383..903741 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
RIEAN_RS04175 (Riean_0827)	dprA	903925..905028 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
RIEAN_RS04180 (Riean_0828)	-	905031..905408 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
RIEAN_RS04185 (Riean_0829)	ruvC	905419..905973 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
RIEAN_RS04190 (Riean_0830)	-	905997..907187 (-)	1191	WP_004918090.1	carboxypeptidase-like regulatory domain-containing protein	-
RIEAN_RS04195 (Riean_0831)	-	907217..907690 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=39030 RIEAN_RS04175 WP_004918085.1 903925..905028(-) (dprA) [Riemerella anatipestifer ATCC 11845 = DSM 15868]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=39030 RIEAN_RS04175 WP_004918085.1 903925..905028(-) (dprA) [Riemerella anatipestifer ATCC 11845 = DSM 15868]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1