Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FSA31_RS04330 Genome accession   NZ_CP044492
Coordinates   887773..889527 (+) Length   584 a.a.
NCBI ID   WP_002284279.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 882773..894527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS04305 (FSA31_0853) queE 883178..883894 (-) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  FSA31_RS04310 (FSA31_0854) queD 883891..884337 (-) 447 WP_002284281.1 6-carboxytetrahydropterin synthase QueD -
  FSA31_RS04315 (FSA31_0855) queC 884337..884990 (-) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  FSA31_RS04320 (FSA31_0856) rcrR 885543..885977 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FSA31_RS04325 (FSA31_0857) rcrP 885981..887783 (+) 1803 WP_002284280.1 ABC transporter ATP-binding protein Regulator
  FSA31_RS04330 (FSA31_0858) rcrQ 887773..889527 (+) 1755 WP_002284279.1 ABC transporter ATP-binding protein Regulator
  FSA31_RS04335 (FSA31_0859) tpx 889724..890209 (+) 486 WP_002275877.1 thiol peroxidase -
  FSA31_RS04340 (FSA31_0860) - 890227..890670 (+) 444 WP_050557105.1 hypothetical protein -
  FSA31_RS04345 (FSA31_0861) - 890900..891523 (+) 624 WP_002268771.1 GTP pyrophosphokinase family protein -
  FSA31_RS04350 (FSA31_0862) - 891524..892210 (+) 687 WP_002263646.1 response regulator transcription factor -
  FSA31_RS04355 (FSA31_0863) - 892216..893448 (+) 1233 WP_002263647.1 HAMP domain-containing sensor histidine kinase -
  FSA31_RS04360 (FSA31_0864) - 893505..893855 (-) 351 WP_002263648.1 DUF1304 family protein -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64521.51 Da        Isoelectric Point: 5.9187

>NTDB_id=390294 FSA31_RS04330 WP_002284279.1 887773..889527(+) (rcrQ) [Streptococcus mutans strain T8]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAATILLIGSIFMM
IKTNGALAATAILSVFAGFVVSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEGIEDENHKVKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIINLLMRFYEVDRGM
ISIDGVNIHDMTREEVHDAFAMVLQDTWLFEGTIKENLIYNQKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=390294 FSA31_RS04330 WP_002284279.1 887773..889527(+) (rcrQ) [Streptococcus mutans strain T8]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTTTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGACAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTACGATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGGTATCCACTGTTATCATGGC
CAAGAGTCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTATAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGCATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCCTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAACGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGGAATAGAAGACGAAAACCATAAAGTCAAACAACTTGAAAAAGTTGAAGGAAATGTTAACTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTATTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGTGTTAATATCCATGATATGACACGAGAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAATTAAGGAAAATCTGATTTATAATCAAAAACATATTACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTCCTTAAAGATGCACCGCTTCTGATACTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGCAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

98.973

100

0.99

Multiple sequence alignment