Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   FSA31_RS04325 Genome accession   NZ_CP044492
Coordinates   885981..887783 (+) Length   600 a.a.
NCBI ID   WP_002284280.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   regulate competence (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 858343..889527 885981..887783 within 0


Gene organization within MGE regions


Location: 858343..889527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS04210 (FSA31_0833) galE 858406..859407 (+) 1002 WP_002284206.1 UDP-glucose 4-epimerase GalE -
  FSA31_RS04215 (FSA31_0834) - 859675..860754 (+) 1080 WP_002262882.1 serine hydrolase -
  FSA31_RS04220 (FSA31_0835) - 860997..861500 (+) 504 WP_002269391.1 phosphatase PAP2 family protein -
  FSA31_RS04225 (FSA31_0836) - 861664..862269 (+) 606 WP_002284205.1 TetR/AcrR family transcriptional regulator -
  FSA31_RS04230 (FSA31_0837) - 862344..863060 (+) 717 WP_002284204.1 ABC transporter ATP-binding protein -
  FSA31_RS04235 (FSA31_0838) - 863047..864588 (+) 1542 WP_002284203.1 hypothetical protein -
  FSA31_RS04240 (FSA31_0839) - 864697..865071 (+) 375 WP_002262891.1 DUF1149 family protein -
  FSA31_RS04245 (FSA31_0840) - 865077..865922 (+) 846 WP_002284202.1 DegV family protein -
  FSA31_RS04250 (FSA31_0841) dapB 865934..866701 (+) 768 WP_002284201.1 4-hydroxy-tetrahydrodipicolinate reductase -
  FSA31_RS04255 (FSA31_0842) - 866698..867912 (+) 1215 WP_002284200.1 CCA tRNA nucleotidyltransferase -
  FSA31_RS04260 (FSA31_0844) - 867905..869774 (+) 1870 Protein_785 ABC-F family ATP-binding cassette domain-containing protein -
  FSA31_RS04265 (FSA31_0845) - 870230..871966 (+) 1737 WP_002284198.1 ABC transporter ATP-binding protein -
  FSA31_RS04270 (FSA31_0846) - 871977..873749 (+) 1773 WP_002270316.1 ABC transporter ATP-binding protein -
  FSA31_RS04275 (FSA31_0847) - 873865..874785 (+) 921 WP_002266551.1 AEC family transporter -
  FSA31_RS04280 (FSA31_0848) gtfD 875005..879393 (+) 4389 WP_151416628.1 glucosyltransferase-S -
  FSA31_RS04285 (FSA31_0849) - 879568..880077 (-) 510 WP_002284196.1 DUF308 domain-containing protein -
  FSA31_RS04290 (FSA31_0850) gdhA 880724..882073 (+) 1350 WP_002263849.1 NADP-specific glutamate dehydrogenase -
  FSA31_RS04295 (FSA31_0851) - 882185..882568 (-) 384 WP_002265142.1 DUF3021 family protein -
  FSA31_RS04300 (FSA31_0852) queF 882677..883165 (-) 489 WP_002265143.1 preQ(1) synthase -
  FSA31_RS04305 (FSA31_0853) queE 883178..883894 (-) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  FSA31_RS04310 (FSA31_0854) queD 883891..884337 (-) 447 WP_002284281.1 6-carboxytetrahydropterin synthase QueD -
  FSA31_RS04315 (FSA31_0855) queC 884337..884990 (-) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  FSA31_RS04320 (FSA31_0856) rcrR 885543..885977 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FSA31_RS04325 (FSA31_0857) rcrP 885981..887783 (+) 1803 WP_002284280.1 ABC transporter ATP-binding protein Regulator
  FSA31_RS04330 (FSA31_0858) rcrQ 887773..889527 (+) 1755 WP_002284279.1 ABC transporter ATP-binding protein Regulator

Sequence


Protein


Download         Length: 600 a.a.        Molecular weight: 66967.78 Da        Isoelectric Point: 9.7310

>NTDB_id=390293 FSA31_RS04325 WP_002284280.1 885981..887783(+) (rcrP) [Streptococcus mutans strain T8]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEAEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKNLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSVTAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAIFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGETVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQNYSHDDLNNKVGYIPQRAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKNFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLAKKTKEMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=390293 FSA31_RS04325 WP_002284280.1 885981..887783(+) (rcrP) [Streptococcus mutans strain T8]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGGAGCTTTTTTATGGCCGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCTAGCTTTACGACCCGTCTTCGATCTGATATTTTCAATCGAGTTATGGATTATTCAGAGGCGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCCGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAACCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCGCTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGTGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTCGCTATCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAAGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCTAAAGCTGGTGAGACAGTTGCTTTTATTGGCTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGAATCAAAGTGCAAAATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAGGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAATATTGCATTTGGGCAAAGCGATCAAG
CGCCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAACTAGCCCAAGCCAAAAACTTTGTTGAAGAAAAAGAAAAGGGT
CTGGATACCGAGGTAGCTCAAGGCGGTACCAATTTCTCTGGCGGTCAAAAGCAGCGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGCAAAGAAAACCAAAGAAATGACTAAGTTGATTGTCGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTA
GTCTTAGATCAAGGAAAGGTTGTTGGCCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.833

100

0.998


Multiple sequence alignment