Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FSA31_RS03090 Genome accession   NZ_CP044492
Coordinates   623012..624811 (+) Length   599 a.a.
NCBI ID   WP_002284841.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 618012..629811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS03060 (FSA31_0606) - 618291..619259 (+) 969 WP_002261900.1 zinc-binding dehydrogenase -
  FSA31_RS03065 - 619292..619419 (-) 128 Protein_551 transcriptional regulator -
  FSA31_RS03070 (FSA31_0607) - 619504..619785 (+) 282 WP_002261899.1 hypothetical protein -
  FSA31_RS03075 (FSA31_0608) - 619891..620784 (+) 894 WP_002267117.1 alpha/beta hydrolase -
  FSA31_RS03080 (FSA31_0609) - 620824..621717 (-) 894 WP_076611617.1 IS982-like element ISSmu5 family transposase -
  FSA31_RS03085 (FSA31_0610) - 622052..622990 (+) 939 WP_002275542.1 competence protein CoiA family protein -
  FSA31_RS03090 (FSA31_0611) pepF 623012..624811 (+) 1800 WP_002284841.1 oligoendopeptidase F Regulator
  FSA31_RS03095 (FSA31_0612) - 625027..625644 (+) 618 WP_002275807.1 HAD-IA family hydrolase -
  FSA31_RS03100 (FSA31_0613) - 625694..626401 (+) 708 WP_002275166.1 O-methyltransferase -
  FSA31_RS03105 (FSA31_0614) prsA 626463..627464 (+) 1002 WP_002284840.1 peptidylprolyl isomerase PrsA -
  FSA31_RS03110 (FSA31_0615) - 627703..628203 (+) 501 WP_002284839.1 LURP-one-related family protein -

Sequence

Protein


Download         Length: 599 a.a.        Molecular weight: 69723.31 Da        Isoelectric Point: 4.7752

>NTDB_id=390289 FSA31_RS03090 WP_002284841.1 623012..624811(+) (pepF) [Streptococcus mutans strain T8]
MSDNRSHIEEKYQWDLTSIFPNDQTWEKEEKSLAKDLEIAVKRAGHLLDSSQSLLEITELYLALSRRLEKLYVYASMKND
QDTTVSYYQELQAKATALIAKFNQTFAFYEPEFMLLSTEKYQDFLADCPDLLPYQHFFEKLFKQKKHVLSQKEEALLAEA
SEIFGAAGETFEILDNADIIFPWVKDETGEEVELSHGNFISLMESKNRKVRQEAYKAMYSIYEQYQHTYAKTLQTNVKVN
NFQAKIRNYKSAREAALAANFIPETVYDTLVEAVHNHLPLLQRYVKLRQNVLGLDDLKMYDIYVPLSEMDMTFTYEAALD
KAEEVLAIFGRDYAERVHRAFRERWIDVRVNKGKRSGAYSGGSYDTNAFILLNWQDTLDNLFTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLKEATDEKQRFAILNHYLDGFKGTVFRQTQFAEFEDLIYKADQAGDVLTSDY
LNNLYADLNEKYYGLSKKNNPEIQYEWARIPHFYYNFYVYQYATGFAAASFLAHKIVHGNQEDKDKYLNYLKAGNSDYPL
NVIAKAGLDMTESTYLDQAFKVFEERLIELEELVEKGID

Nucleotide


Download         Length: 1800 bp        

>NTDB_id=390289 FSA31_RS03090 WP_002284841.1 623012..624811(+) (pepF) [Streptococcus mutans strain T8]
ATGTCTGATAATCGCAGTCATATTGAAGAAAAATACCAATGGGATTTGACCAGCATTTTTCCAAACGATCAAACTTGGGA
AAAAGAGGAGAAATCTTTAGCTAAGGATTTGGAAATAGCCGTTAAAAGAGCGGGTCATCTGCTTGACTCCAGTCAAAGTC
TGCTGGAGATCACAGAACTTTATCTGGCTTTGAGCCGTCGTTTGGAAAAACTTTATGTTTATGCTTCTATGAAGAATGAC
CAAGACACCACGGTCAGTTACTATCAAGAATTACAAGCTAAGGCAACAGCCTTGATCGCTAAATTTAATCAGACTTTTGC
CTTCTATGAGCCTGAATTTATGCTGTTATCAACAGAAAAATATCAGGATTTTTTGGCAGATTGTCCGGATTTATTGCCTT
ATCAACATTTTTTTGAAAAATTATTCAAACAAAAAAAGCATGTTCTTTCTCAAAAGGAAGAGGCACTTTTGGCTGAAGCC
AGTGAAATTTTTGGTGCTGCTGGTGAAACCTTTGAAATTCTTGACAATGCCGATATTATCTTTCCTTGGGTAAAAGACGA
GACAGGAGAAGAAGTTGAACTATCTCATGGTAATTTCATCAGTTTGATGGAATCCAAAAACCGCAAAGTTCGACAAGAAG
CTTATAAGGCCATGTACAGCATTTATGAGCAGTATCAACACACCTATGCTAAAACGCTGCAAACCAATGTTAAAGTTAAT
AATTTTCAAGCGAAAATCAGAAACTATAAGAGTGCGCGTGAAGCTGCTCTGGCAGCTAATTTTATTCCCGAAACTGTTTA
TGACACTTTAGTAGAAGCGGTCCATAATCACTTACCTTTGTTACAGCGTTATGTGAAGCTAAGGCAAAACGTTTTAGGCC
TTGATGATCTTAAGATGTATGATATTTACGTACCACTCTCAGAAATGGATATGACTTTTACTTATGAAGCAGCCTTGGAC
AAAGCAGAAGAAGTGTTAGCTATTTTTGGGCGAGACTATGCTGAGCGTGTGCATCGTGCATTTAGGGAGCGTTGGATTGA
TGTACGAGTCAATAAAGGCAAGCGTTCAGGCGCTTATTCAGGCGGATCCTATGACACCAATGCTTTTATATTACTTAACT
GGCAGGATACTTTGGATAACCTCTTCACTCTTGTGCATGAAACAGGACATTCTTTGCATTCTACTTTTACACGTGAAAAT
CAACCCTATGTTTATGGTGATTATTCTATTTTCTTGGCAGAAATTGCTTCTACAACCAATGAAAATATTTTGACAGAGAC
ACTGCTCAAGGAAGCAACAGATGAGAAACAGCGTTTTGCGATTTTGAATCATTATCTTGATGGTTTCAAAGGAACGGTTT
TCCGCCAAACACAATTTGCAGAATTTGAAGACTTGATTTATAAGGCTGATCAAGCAGGTGACGTTTTGACCAGTGATTAT
TTGAATAATCTCTATGCGGATCTCAATGAAAAATACTATGGTTTAAGCAAGAAAAATAATCCGGAAATTCAGTATGAATG
GGCTAGGATTCCGCATTTCTATTACAATTTTTATGTTTATCAGTATGCCACAGGCTTTGCTGCAGCTAGTTTTTTGGCTC
ACAAAATTGTTCATGGCAATCAAGAAGATAAGGACAAATATCTCAATTATCTCAAAGCTGGCAATTCAGACTATCCTCTC
AATGTTATTGCTAAAGCAGGTCTTGATATGACTGAGTCGACCTATCTTGACCAAGCCTTCAAAGTCTTTGAAGAACGGTT
AATAGAGTTGGAAGAGTTGGTCGAAAAAGGAATTGATTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

69.398

99.833

0.693

Multiple sequence alignment