Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   FSA31_RS02505 Genome accession   NZ_CP044492
Coordinates   504798..505838 (+) Length   346 a.a.
NCBI ID   WP_002264420.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 499798..510838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS02475 (FSA31_0488) - 500061..500264 (+) 204 WP_002270141.1 hypothetical protein -
  FSA31_RS02480 (FSA31_0489) - 500305..500550 (+) 246 WP_002268902.1 hypothetical protein -
  FSA31_RS02485 (FSA31_0490) - 500746..501312 (+) 567 WP_002267335.1 TetR/AcrR family transcriptional regulator -
  FSA31_RS02490 (FSA31_0491) - 501433..503208 (+) 1776 WP_002272864.1 oleate hydratase -
  FSA31_RS02495 (FSA31_0493) rsmD 503791..504330 (+) 540 WP_002262037.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FSA31_RS02500 (FSA31_0494) coaD 504320..504820 (+) 501 WP_002284962.1 pantetheine-phosphate adenylyltransferase -
  FSA31_RS02505 (FSA31_0495) sepM 504798..505838 (+) 1041 WP_002264420.1 S16 family serine protease SepM Regulator
  FSA31_RS02510 (FSA31_0496) - 505911..507242 (+) 1332 WP_151416611.1 metallophosphoesterase -
  FSA31_RS02515 (FSA31_0497) - 507239..507787 (+) 549 WP_002262041.1 YutD-like domain-containing protein -
  FSA31_RS02520 (FSA31_0498) rlmN 507784..508869 (+) 1086 WP_002264424.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  FSA31_RS02525 (FSA31_0499) - 508869..509405 (+) 537 WP_002284965.1 VanZ family protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37952.90 Da        Isoelectric Point: 10.1655

>NTDB_id=390285 FSA31_RS02505 WP_002264420.1 504798..505838(+) (sepM) [Streptococcus mutans strain T8]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=390285 FSA31_RS02505 WP_002264420.1 504798..505838(+) (sepM) [Streptococcus mutans strain T8]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGCTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCCTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTCGATATTTACGATCAACTAGTGAAAGAGGATTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCTGATATGAAAGTAGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCAAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(131-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.711

100

0.997

Multiple sequence alignment