Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   FSC11_RS02210 Genome accession   NZ_CP044483
Coordinates   450094..450957 (+) Length   287 a.a.
NCBI ID   WP_205681856.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain HZE30-1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 445094..455957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC11_RS02185 (FSC11_02190) - 445382..446584 (+) 1203 WP_163164863.1 CsgG/HfaB family protein -
  FSC11_RS02190 (FSC11_02195) - 446668..447345 (+) 678 WP_163164865.1 hypothetical protein -
  FSC11_RS02195 (FSC11_02200) - 447606..448181 (-) 576 WP_005223320.1 xanthine phosphoribosyltransferase -
  FSC11_RS02200 (FSC11_02205) - 448272..448985 (-) 714 WP_004809730.1 DUF3108 domain-containing protein -
  FSC11_RS02205 (FSC11_02210) - 449137..449826 (-) 690 WP_071319875.1 hypothetical protein -
  FSC11_RS02210 (FSC11_02215) tonB2 450094..450957 (+) 864 WP_205681856.1 energy transducer TonB Machinery gene
  FSC11_RS02215 (FSC11_02220) - 450954..451253 (-) 300 WP_004896079.1 antibiotic biosynthesis monooxygenase family protein -
  FSC11_RS02220 (FSC11_02225) - 451285..451677 (-) 393 WP_163164869.1 hypothetical protein -
  FSC11_RS02225 (FSC11_02230) ybeY 451821..452303 (-) 483 WP_004809720.1 rRNA maturation RNase YbeY -
  FSC11_RS02230 (FSC11_02235) - 452326..453402 (-) 1077 WP_004809719.1 PhoH family protein -
  FSC11_RS02235 (FSC11_02240) miaB 453442..454899 (-) 1458 WP_163164871.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32761.41 Da        Isoelectric Point: 9.5616

>NTDB_id=390247 FSC11_RS02210 WP_205681856.1 450094..450957(+) (tonB2) [Acinetobacter schindleri strain HZE30-1]
MPLVKSWWKDPIFSSAVGIAALLHIMILMLQFGMPSEQDTSTKEIAVSLRISNDKIEHADFLAQTDQQGSGQFREVHRMS
SDAPLPMPDQAAGKEAMLQNSQDMLQQKQELSFEEKVLMTTLSWQKQAEENHRKKRQEELNSQLQAKAAMVASLEAQYTQ
RQKNFSRQQKIKTVDGIQAKQDVSAAYLEKFRQKVEFYGNRFYPESARIQRLAGDVRLMVILNQNGGIRAIRLLESSGHT
VLDEAARTSLRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 864 bp        

>NTDB_id=390247 FSC11_RS02210 WP_205681856.1 450094..450957(+) (tonB2) [Acinetobacter schindleri strain HZE30-1]
ATGCCCTTGGTTAAATCATGGTGGAAAGATCCAATTTTTAGCAGTGCTGTAGGGATTGCTGCATTGTTACATATCATGAT
TTTAATGCTGCAGTTTGGAATGCCATCGGAACAGGATACTTCGACCAAGGAAATTGCAGTCAGCCTGCGAATCAGTAATG
ACAAAATCGAGCATGCTGATTTTCTTGCCCAAACAGATCAGCAAGGTTCCGGTCAGTTCCGTGAAGTGCATCGTATGTCC
AGTGATGCTCCATTGCCGATGCCGGATCAGGCAGCTGGAAAAGAAGCAATGCTTCAAAACAGCCAAGATATGCTGCAACA
AAAACAGGAGTTGAGCTTTGAAGAAAAAGTTCTGATGACAACCCTAAGCTGGCAGAAACAGGCAGAAGAAAATCATCGCA
AGAAACGTCAGGAAGAACTCAACAGCCAGCTTCAAGCCAAAGCTGCTATGGTCGCGAGTCTGGAAGCTCAATATACGCAG
CGCCAGAAAAACTTTAGCCGTCAGCAGAAAATTAAAACTGTTGACGGTATCCAAGCCAAGCAGGATGTATCTGCAGCTTA
TCTGGAAAAATTCCGTCAAAAAGTCGAATTTTATGGGAATCGTTTTTATCCTGAATCTGCCCGTATACAGCGCTTGGCGG
GTGACGTCCGCTTAATGGTGATTCTGAATCAAAATGGGGGTATTCGAGCGATTCGATTGTTGGAATCTTCTGGTCATACT
GTATTGGATGAAGCTGCTCGAACCTCATTACGTAAGGCTGCGCCGTTTGGTGCTTTCGATGCCAAAATGAAAGATATTTC
AGAATTACGAATTATCCGAACCTGGCGTTTTGATCCGGCAGAAGCCGAGTTTGAAGTGCGTTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(201-277)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

70.714

97.561

0.69

Multiple sequence alignment