Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   FSC09_RS12500 Genome accession   NZ_CP044455
Coordinates   2565214..2566092 (-) Length   292 a.a.
NCBI ID   WP_005182159.1    Uniprot ID   N9KSY6
Organism   Acinetobacter indicus strain B18     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2560214..2571092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC09_RS12480 (FSC09_12525) miaB 2561765..2563219 (+) 1455 WP_163146145.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  FSC09_RS12485 (FSC09_12530) - 2563261..2564334 (+) 1074 WP_016659561.1 PhoH family protein -
  FSC09_RS12490 (FSC09_12535) ybeY 2564354..2564836 (+) 483 WP_163146146.1 rRNA maturation RNase YbeY -
  FSC09_RS12495 (FSC09_12540) - 2564927..2565217 (+) 291 WP_163146147.1 antibiotic biosynthesis monooxygenase family protein -
  FSC09_RS12500 (FSC09_12545) tonB2 2565214..2566092 (-) 879 WP_005182159.1 energy transducer TonB Machinery gene
  FSC09_RS12505 (FSC09_12550) - 2566332..2567015 (+) 684 WP_016659565.1 hypothetical protein -
  FSC09_RS12510 (FSC09_12555) - 2567169..2567882 (+) 714 WP_163146148.1 DUF3108 domain-containing protein -
  FSC09_RS12515 (FSC09_12560) - 2567972..2568547 (+) 576 WP_005182137.1 xanthine phosphoribosyltransferase -
  FSC09_RS12520 (FSC09_12565) - 2568765..2569145 (+) 381 WP_005182135.1 hypothetical protein -
  FSC09_RS12525 (FSC09_12570) - 2569203..2569385 (-) 183 WP_045796412.1 hypothetical protein -
  FSC09_RS12530 (FSC09_12575) wrbA 2569688..2570284 (-) 597 WP_104470746.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33024.72 Da        Isoelectric Point: 9.1867

>NTDB_id=390133 FSC09_RS12500 WP_005182159.1 2565214..2566092(-) (tonB2) [Acinetobacter indicus strain B18]
MLKKFHFAPLTQQWWKDPLFGTVLTLAALSHLAVLTVQFVMPQQSDAAVKEIAVSLRPSATEIKDADFLAQADQQGSGTF
REAHRMSSDMPAPMIEQSAGDQQLESLERLQQQRELSFEEKVLMTTLSWQKQAAENQRKKALEELNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDVAAGYLEKFRQKVEFYGNRYYPEAAKQQQLAGEVRLMVILNANGGIRAIRLIE
SSGHAMLDEAAKASVRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 879 bp        

>NTDB_id=390133 FSC09_RS12500 WP_005182159.1 2565214..2566092(-) (tonB2) [Acinetobacter indicus strain B18]
ATGTTAAAGAAATTTCATTTTGCACCTTTGACGCAGCAGTGGTGGAAAGATCCACTATTTGGCACCGTACTGACGCTGGC
GGCACTTTCGCATCTGGCTGTGTTAACGGTGCAATTTGTCATGCCACAGCAAAGCGATGCCGCGGTCAAGGAAATTGCAG
TCAGCTTAAGACCAAGTGCCACCGAAATTAAGGATGCCGACTTTTTAGCACAGGCCGACCAGCAGGGTTCTGGCACCTTC
CGGGAAGCGCACCGCATGTCCAGCGATATGCCCGCACCAATGATTGAACAGAGTGCCGGTGATCAGCAGCTGGAAAGTCT
TGAGCGTTTGCAGCAGCAGCGTGAACTGAGCTTTGAAGAAAAAGTGCTAATGACCACCTTAAGCTGGCAAAAGCAGGCGG
CCGAAAACCAGCGTAAAAAAGCGCTGGAAGAATTAAACAGCCAGTTTCAGGCCAAAGCGGCGATGGTGGCCAGTCTGGAA
GCGCAGTATTTACAGCGTCAGCAAAATTTTAGCCGTCAGCAGAAAATTAAAACCGTAGATGGAATTCAGGCCAAGCAGGA
TGTCGCAGCCGGTTATCTGGAAAAATTCCGTCAGAAAGTCGAATTTTATGGTAACCGTTATTATCCGGAAGCGGCCAAGC
AGCAACAGCTGGCCGGTGAAGTACGTTTAATGGTGATTTTAAATGCCAACGGCGGGATTCGCGCGATTCGTTTAATTGAA
AGCTCGGGGCATGCCATGCTGGATGAAGCTGCTAAAGCCTCAGTACGAAAAGCTGCTCCTTTTGGTGCCTTTGATGCCAA
GATGAAAGATATTTCCGAGCTACGCATTATCCGGACCTGGCGTTTTGATCCGGCTGAGGCGGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KSY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.344

95.548

0.729

Multiple sequence alignment