Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FSC09_RS03810 Genome accession   NZ_CP044455
Coordinates   785261..789754 (+) Length   1497 a.a.
NCBI ID   WP_163145553.1    Uniprot ID   A0A6C0Y068
Organism   Acinetobacter indicus strain B18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 780261..794754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC09_RS03785 (FSC09_03790) - 780756..781397 (-) 642 WP_075167117.1 hypothetical protein -
  FSC09_RS03790 (FSC09_03795) pilG 781678..782061 (+) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  FSC09_RS03795 (FSC09_03800) - 782078..782446 (+) 369 WP_005179539.1 PleD family two-component system response regulator -
  FSC09_RS03800 (FSC09_03805) - 782450..782986 (+) 537 WP_005179538.1 chemotaxis protein CheW -
  FSC09_RS03805 (FSC09_03810) - 783032..785104 (+) 2073 Protein_743 methyl-accepting chemotaxis protein -
  FSC09_RS03810 (FSC09_03815) chpA 785261..789754 (+) 4494 WP_163145553.1 Hpt domain-containing protein Regulator
  FSC09_RS03815 (FSC09_03820) - 789751..790212 (+) 462 WP_075167114.1 hypothetical protein -
  FSC09_RS03820 (FSC09_03825) dapE 790282..791415 (-) 1134 WP_005179534.1 succinyl-diaminopimelate desuccinylase -
  FSC09_RS03825 (FSC09_03830) - 791542..791688 (-) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  FSC09_RS03830 (FSC09_03835) - 791789..792691 (-) 903 WP_016659332.1 DUF1853 family protein -
  FSC09_RS03835 (FSC09_03840) - 792782..793171 (+) 390 WP_163145554.1 YbaN family protein -
  FSC09_RS03840 (FSC09_03845) elsL 793168..793698 (+) 531 WP_163145555.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1497 a.a.        Molecular weight: 166806.17 Da        Isoelectric Point: 4.2906

>NTDB_id=390119 FSC09_RS03810 WP_163145553.1 785261..789754(+) (chpA) [Acinetobacter indicus strain B18]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQEMLTTIRRHFHTLKGSGRMVGAKSA
GELAWAVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLRSSDSITGLEFDTASTDEQGAADTELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSSETGTTEAVTETAET
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMSASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDASALEFELEQPAPAETAYTAPEDEQPDTSSEPVLEDAPTLAEQTIPTDAVSTTENDGEDNL
HSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNSN
AYDALLNTTVVWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNTTDLLAPSKTFEFVQGDGAEPPSMQGEWSET
AQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHSR
YTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIV
RQTSSTLNRPAELVVNNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFTD
DGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKGT
TFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLSN
IAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKHV
MEPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVRH
HDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4494 bp        

>NTDB_id=390119 FSC09_RS03810 WP_163145553.1 785261..789754(+) (chpA) [Acinetobacter indicus strain B18]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAATGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGTATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGGCGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGCCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCCCAGCCGATGGCACTGGACC
TGCGTCCATTGGTGCTATTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCTTTAGAAGAGCTGTTACAACTG
GCAAGCAGCCTAAGGTCCAGCGACAGTATCACCGGTCTGGAGTTTGATACAGCAAGCACTGATGAGCAGGGTGCTGCAGA
CACCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACGGTGGATCGCTTCCTGGCACACGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACTTCCAAAGAAACCGCACTGTTATTGCAGTATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACTTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGCGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGATAAGCCAAGCTTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGACAACGCGTCAGCTTAAGCGAAGACGCCCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCTCAGAAACTGGCACCACAGAAGCTGTCACCGAAACGGCTGAAACC
GGTGCAGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGACAGCGCTGAAGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAGGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACCCGAGCAATACTGCTGCGCTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAGATGAG
CGCATCGACCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCATCTGCACTTGAGTTTGAACT
GGAACAGCCAGCACCTGCAGAAACAGCCTATACTGCGCCTGAAGATGAGCAGCCAGACACCAGCAGCGAACCGGTACTGG
AAGATGCACCGACCCTGGCTGAGCAAACCATCCCTACAGATGCGGTATCTACTACTGAAAATGACGGTGAAGACAATCTG
CATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCCGAGGAACTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTGGTT
TGACCATCGTAGTGACCGAAGTATTTTGCTGCAGTTACAACGTGCTGCGCATAGTCTGAAAGGCGGCGCGCGTATGGCTG
AAATCGAGCCGGTGGCCGTGATTGCTTATCAGCTGGAAAATACCTTTGAACAGTTTGCGGTGCATCAGTTTAATTCCAAT
GCTTATGATGCCTTGCTCAACACCACTGTGGTCTGGTTAAAAGAAGCCATCTTCCAGCGTGATTACAGCAATTTTGACAG
CCTGAAAGCTAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCACAGCTGCCAGAACGCTTTAATACCACCGATCTGC
TGGCGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAAACC
GCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGAAAA
CGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTAAAC
GTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCACGC
TATACCGACTTCGACCCGCTGGAGATGGACCAGTATTCATCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGCGTC
GGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCTGAAGGTCTGTTACTGCAACAGTCGCGGATTC
AGGCAGAAATTCAGGAAAGCCTGATGCGCACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATTGTG
CGTCAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTAAACAATACCGAAGGCGAGCTGGACCGGACTATTCT
GGAACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGTCTGGAAGATGCCGCTGTACGTAAAC
AGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACCGAT
GATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAGCAGCTGGA
CAAGAAAGAAATCCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAAGCCGTGACCCAAATTTCGGGTCGTGGCG
TCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTAGGTGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGCACT
ACTTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCTTGATGGTAAAAGTTGGCGATCAGCAGTTCGCAAT
TCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCGCTGGAAAGTTACTTCAGCAGCAAAGATGACTACT
TCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAACCAGCCATTGCCGCGTTTAAGCAAT
ATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACCGGTCAGACCATTGCCTTACTGGTCGATCAGCTGATTGG
TTCGCGTGGCCAGATTGTGATGAAACCGATTGGGCAGCAGTTCTCCAGCGTGGGCTCGATTGCCGGCGCGACCATTCTCG
GTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCCACCCAGCGCATCAAGCATGTG
ATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAAGGT
CACGTCACGTCTGCTCGAACGTCAGGGCTTTGATGTGGTCACAGCCAAAGATGGTGTCGATGCGATTGAGCAGCTGGAAA
ATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGCCAC
CATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAGCTT
GGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCAGTG
AGGCTAAAGCATGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1073-1208)

CheW-like domain (CheW)

(1215-1350)

Hpt domain (Hpt)

(726-790)

Hpt domain (Hpt)

(204-284)

Hpt domain (Hpt)

(512-598)

Hpt domain (Hpt)

(25-110)

Response regulator receiver domain (Response_reg)

(1375-1486)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.773

100

0.62

Multiple sequence alignment