Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   FSC05_RS13360 Genome accession   NZ_CP044450
Coordinates   2801639..2802796 (+) Length   385 a.a.
NCBI ID   WP_163143169.1    Uniprot ID   A0A7S7ADV3
Organism   Acinetobacter indicus strain MMS9-2     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2796639..2807796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC05_RS13345 (FSC05_13420) - 2798357..2800408 (-) 2052 WP_104503910.1 TonB-dependent copper receptor -
  FSC05_RS13350 (FSC05_13425) - 2800482..2800904 (-) 423 WP_016658991.1 DUF2946 family protein -
  FSC05_RS13355 (FSC05_13430) def 2800995..2801519 (-) 525 WP_005181462.1 peptide deformylase -
  FSC05_RS13360 (FSC05_13435) tsaP 2801639..2802796 (+) 1158 WP_163143169.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  FSC05_RS13365 (FSC05_13440) dprA 2802813..2803955 (+) 1143 WP_005181456.1 DNA-processing protein DprA Machinery gene
  FSC05_RS13370 (FSC05_13445) - 2804000..2804566 (+) 567 WP_127800662.1 L-threonylcarbamoyladenylate synthase -
  FSC05_RS13375 (FSC05_13455) - 2804947..2805858 (-) 912 WP_163143172.1 DMT family transporter -
  FSC05_RS13380 (FSC05_13460) - 2806187..2806729 (+) 543 WP_005181445.1 glutathione peroxidase -
  FSC05_RS13385 (FSC05_13465) - 2806912..2807520 (+) 609 WP_127800678.1 hypothetical protein -

Sequence

Protein


Download         Length: 385 a.a.        Molecular weight: 42520.55 Da        Isoelectric Point: 9.0618

>NTDB_id=390102 FSC05_RS13360 WP_163143169.1 2801639..2802796(+) (tsaP) [Acinetobacter indicus strain MMS9-2]
MKKVLKGTSSFRALGLKQQALALAVCFSFGVGAVSTVQAAPARNINPPTLQANAPNVYVVKKGDTLWDISKKFLQNPLRW
REIWASNKHVKNPHWIFPGDRLLMCTYDGRPIIGKDEGDGCEGIIRRYTGNTTSLQPQIRVESLNNTIPVIPLEYIQHWL
ERTSIIAPESLQQTPYILGTADQRVLAAKGQNVYARGQGLQVGQRYAVYREGEPYIFTNANGKKYNAGLELTQVASGIAV
RGENDITTLELTDTYNAEVRRGDRVLPEYDPMLPTLFYPTNAEHIAADGQVVRVMGSIGTAAKHSVVTIDRGQAHGVQSG
HVFAVTQKGEVVTDPKTRERVQLPGERIGYAMVFKTFDQLSYAYILDSELPIKVGAGIQPPIMED

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=390102 FSC05_RS13360 WP_163143169.1 2801639..2802796(+) (tsaP) [Acinetobacter indicus strain MMS9-2]
ATGAAAAAGGTTTTGAAGGGCACATCTTCTTTTCGTGCCTTGGGGTTAAAACAGCAGGCGCTGGCACTTGCTGTCTGTTT
CAGTTTTGGGGTGGGCGCAGTCAGTACTGTACAGGCCGCACCGGCACGCAATATCAACCCACCGACCTTACAGGCCAATG
CACCAAATGTGTATGTGGTGAAAAAAGGCGATACGCTGTGGGATATTTCCAAGAAGTTTCTGCAAAACCCGCTGCGCTGG
CGTGAAATCTGGGCCAGCAACAAGCACGTGAAAAATCCGCACTGGATTTTCCCTGGAGATCGCCTGCTGATGTGTACCTA
TGATGGCCGCCCGATCATTGGTAAAGATGAAGGTGATGGCTGTGAAGGTATTATCCGTCGTTATACGGGTAACACCACCA
GCCTGCAGCCGCAAATCCGGGTCGAGTCACTCAACAATACCATTCCGGTGATTCCACTGGAGTACATCCAGCACTGGCTG
GAACGCACCAGCATTATTGCCCCTGAATCTTTGCAACAGACGCCTTATATTTTAGGCACGGCGGATCAGCGTGTCCTGGC
GGCCAAAGGCCAGAATGTCTATGCCCGCGGTCAGGGTCTGCAAGTTGGCCAGCGTTATGCTGTGTATCGTGAAGGCGAAC
CGTATATCTTCACCAATGCCAACGGTAAAAAATACAATGCCGGTCTGGAGCTGACTCAGGTTGCATCCGGTATTGCAGTA
CGCGGTGAAAATGATATTACCACCCTGGAACTGACCGATACCTACAATGCCGAAGTGCGTCGTGGCGATCGTGTGCTGCC
AGAATATGACCCGATGTTACCAACTCTATTCTACCCGACCAATGCCGAACACATTGCAGCAGATGGCCAGGTGGTACGCG
TGATGGGTTCAATTGGGACCGCAGCTAAACACAGTGTGGTCACCATTGACCGTGGTCAGGCGCACGGCGTGCAATCCGGT
CATGTATTTGCTGTAACTCAAAAAGGCGAAGTGGTCACCGATCCGAAAACCCGTGAACGCGTGCAACTACCAGGCGAGCG
TATTGGCTATGCCATGGTCTTTAAAACCTTTGACCAGCTCAGCTATGCCTATATTCTGGACAGCGAACTACCAATTAAAG
TCGGGGCCGGTATTCAGCCACCGATTATGGAAGATTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(58-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7S7ADV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

65.974

100

0.66

Multiple sequence alignment