Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   FSC05_RS11870 Genome accession   NZ_CP044450
Coordinates   2484518..2485396 (-) Length   292 a.a.
NCBI ID   WP_163142863.1    Uniprot ID   -
Organism   Acinetobacter indicus strain MMS9-2     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2479518..2490396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC05_RS11850 (FSC05_11920) miaB 2481071..2482525 (+) 1455 WP_005182171.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  FSC05_RS11855 (FSC05_11925) - 2482567..2483640 (+) 1074 WP_016659561.1 PhoH family protein -
  FSC05_RS11860 (FSC05_11930) ybeY 2483660..2484142 (+) 483 WP_005182166.1 rRNA maturation RNase YbeY -
  FSC05_RS11865 (FSC05_11935) - 2484231..2484521 (+) 291 WP_163142860.1 antibiotic biosynthesis monooxygenase family protein -
  FSC05_RS11870 (FSC05_11940) tonB2 2484518..2485396 (-) 879 WP_163142863.1 energy transducer TonB Machinery gene
  FSC05_RS11875 (FSC05_11945) - 2485637..2486320 (+) 684 WP_127799001.1 hypothetical protein -
  FSC05_RS11880 (FSC05_11950) - 2486474..2487187 (+) 714 WP_005182145.1 DUF3108 domain-containing protein -
  FSC05_RS11885 (FSC05_11955) - 2487277..2487852 (+) 576 WP_005182137.1 xanthine phosphoribosyltransferase -
  FSC05_RS11890 (FSC05_11960) - 2488071..2488451 (+) 381 WP_005182135.1 hypothetical protein -
  FSC05_RS11895 (FSC05_11965) - 2488509..2488691 (-) 183 WP_045796412.1 hypothetical protein -
  FSC05_RS11900 (FSC05_11970) wrbA 2488989..2489585 (-) 597 WP_104470746.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33068.73 Da        Isoelectric Point: 8.3794

>NTDB_id=390092 FSC05_RS11870 WP_163142863.1 2484518..2485396(-) (tonB2) [Acinetobacter indicus strain MMS9-2]
MLKKFHFAPLTQQWWKDPLFGTVLTLAALSHLAVLTVQFVMPQQSDAAVKEIAVSLRPSATEIKDADFLAQADQQGSGTF
REAHRMSSDMPAPMIEQSAGDQQLESLERLQQQRELSFEEKVLMTTLSWQKQAAENQRKKALEELNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDVAAGYLEKFRQKVEFYGNRYYPEAAKQQQLAGEVRLMVILNANGGIRAIRLIE
SSGHAMLDEAAKDSVRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 879 bp        

>NTDB_id=390092 FSC05_RS11870 WP_163142863.1 2484518..2485396(-) (tonB2) [Acinetobacter indicus strain MMS9-2]
ATGTTAAAGAAATTTCATTTTGCACCTTTGACGCAGCAGTGGTGGAAAGATCCACTATTTGGCACCGTACTGACGCTGGC
AGCACTTTCGCATCTGGCTGTGTTAACGGTGCAATTTGTCATGCCACAGCAAAGCGATGCTGCGGTCAAGGAAATTGCGG
TCAGCTTAAGACCAAGTGCCACCGAAATTAAGGACGCCGACTTTTTAGCACAGGCCGATCAGCAGGGTTCTGGCACCTTC
CGGGAAGCGCACCGCATGTCCAGCGATATGCCCGCACCAATGATTGAACAGAGTGCCGGTGATCAGCAGCTGGAAAGTCT
GGAGCGTTTGCAGCAGCAGCGTGAACTGAGCTTTGAAGAAAAAGTGCTAATGACCACCTTAAGCTGGCAAAAGCAGGCGG
CGGAAAACCAGCGTAAAAAAGCGCTGGAAGAATTGAACAGCCAGTTTCAGGCCAAAGCGGCGATGGTGGCCAGTCTGGAA
GCGCAGTATTTACAGCGTCAGCAAAATTTTAGCCGTCAGCAGAAAATTAAAACCGTAGATGGAATTCAGGCCAAGCAGGA
TGTCGCAGCCGGTTATCTGGAAAAATTCCGTCAGAAAGTCGAATTTTATGGTAACCGTTATTATCCGGAAGCGGCCAAGC
AGCAACAGCTGGCCGGTGAAGTACGTTTAATGGTGATTTTAAATGCCAACGGCGGGATTCGCGCGATTCGTTTAATTGAA
AGCTCGGGACATGCCATGCTGGATGAAGCTGCTAAAGACTCAGTACGTAAAGCTGCTCCTTTTGGTGCCTTTGATGCCAA
GATGAAAGATATTTCCGAGCTACGCATTATCCGGACCTGGCGTTTTGATCCGGCTGAGGCGGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

75.986

95.548

0.726

Multiple sequence alignment