Detailed information NTG0390046

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FSC02_RS06615
• Genome accession: NZ_CP044445
• Coordinates: 1375769..1376404 (+)
• Length: 211 a.a.
• NCBI ID: WP_152342358.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain CMG3-2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1370769..1381404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC02_RS06580 (FSC02_06625)	kdsB	1371121..1371885 (+)	765	WP_163142007.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FSC02_RS06585 (FSC02_06630)	-	1371894..1372877 (+)	984	WP_005177500.1	DNA polymerase III, delta' subunit	-
FSC02_RS06590 (FSC02_06635)	-	1372889..1373230 (+)	342	WP_005177501.1	PilZ domain-containing protein	-
FSC02_RS06595 (FSC02_06640)	-	1373260..1374033 (+)	774	WP_163170061.1	TatD family hydrolase	-
FSC02_RS06600 (FSC02_06645)	-	1374093..1374707 (+)	615	WP_075166784.1	TetR/AcrR family transcriptional regulator	-
FSC02_RS06605 (FSC02_06650)	-	1374713..1375285 (+)	573	WP_075166785.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
FSC02_RS06610 (FSC02_06655)	xcpV	1375428..1375772 (+)	345	WP_252725415.1	type II secretion system protein	Machinery gene
FSC02_RS06615 (FSC02_06660)	xcpW	1375769..1376404 (+)	636	WP_152342358.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FSC02_RS06620 (FSC02_06665)	gspK	1376450..1377397 (+)	948	WP_163170063.1	type II secretion system minor pseudopilin GspK	-
FSC02_RS06625 (FSC02_06670)	-	1377545..1378141 (+)	597	WP_005177512.1	6-pyruvoyl trahydropterin synthase family protein	-
FSC02_RS06630 (FSC02_06675)	ung	1378183..1378896 (+)	714	WP_005177514.1	uracil-DNA glycosylase	-
FSC02_RS06635 (FSC02_06680)	-	1378893..1380017 (+)	1125	WP_005177517.1	enoyl-CoA hydratase/isomerase family protein	-
FSC02_RS06640 (FSC02_06685)	tadA	1380021..1380542 (+)	522	WP_163170064.1	tRNA adenosine(34) deaminase TadA	-
FSC02_RS06645 (FSC02_06690)	-	1380600..1381031 (+)	432	WP_104473640.1	SRPBCC family protein	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 24148.46 Da
• Isoelectric Point: 7.2000

>NTDB_id=390046 FSC02_RS06615 WP_152342358.1 1375769..1376404(+) (xcpW) [Acinetobacter indicus strain CMG3-2]
MIKAKRGFTLVELLVAIAIFAVLSALGWKVFDYLVKVKDRNQWHEQQLEGLQGAYQQILRDSIQIVPLTANINNDIQPAL
VLQNGRFNFSKTGVTDPLQQGIAPTERIEYQYRADEQKLYRLKYANLHQSGQDQPVSSVLLDNVSQFQVSVLNPQELSNW
PDSSIDLNDNQQKRKLPKGIKINLTVQDVQYEWIFSLLNTDFLKSDNKTTS

Nucleotide

• Length: 636 bp

>NTDB_id=390046 FSC02_RS06615 WP_152342358.1 1375769..1376404(+) (xcpW) [Acinetobacter indicus strain CMG3-2]
ATGATCAAGGCTAAACGCGGATTTACTCTGGTCGAGCTGCTGGTGGCCATTGCCATCTTTGCGGTGCTGTCTGCCTTAGG
CTGGAAAGTATTTGATTATCTGGTCAAGGTCAAAGACCGTAACCAGTGGCATGAACAGCAGTTAGAAGGATTGCAGGGTG
CCTATCAGCAAATCTTGCGTGACAGCATTCAGATTGTACCGCTGACGGCCAACATCAATAATGATATTCAGCCAGCTTTG
GTATTACAAAACGGCCGTTTTAATTTTAGCAAGACCGGTGTGACCGATCCTTTGCAGCAGGGCATTGCCCCCACTGAACG
GATTGAATATCAGTACCGGGCCGACGAACAAAAACTGTATCGTCTGAAATATGCCAATTTGCATCAATCCGGGCAGGATC
AGCCGGTTTCCAGCGTATTATTGGACAATGTTAGCCAGTTTCAGGTTAGTGTGCTGAATCCGCAGGAACTGAGTAACTGG
CCAGACAGCAGTATTGACTTAAATGATAATCAACAAAAACGCAAACTGCCAAAAGGCATTAAAATAAATTTAACCGTACA
AGATGTACAATATGAATGGATTTTTAGCCTGTTAAATACTGACTTCCTGAAATCAGACAATAAAACCACATCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (3-26)

• Type II secretion system (T2SS), protein J (T2SSJ) (60-194)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	61.735	92.891	0.573