Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   FSC02_RS02385 Genome accession   NZ_CP044445
Coordinates   511538..512416 (+) Length   292 a.a.
NCBI ID   WP_005182159.1    Uniprot ID   N9KSY6
Organism   Acinetobacter indicus strain CMG3-2     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 506538..517416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC02_RS02360 (FSC02_02400) wrbA 507348..507944 (+) 597 WP_104470746.1 NAD(P)H:quinone oxidoreductase -
  FSC02_RS02365 (FSC02_02405) - 508486..508866 (-) 381 WP_005182135.1 hypothetical protein -
  FSC02_RS02370 (FSC02_02410) - 509083..509658 (-) 576 WP_005182137.1 xanthine phosphoribosyltransferase -
  FSC02_RS02375 (FSC02_02415) - 509748..510461 (-) 714 WP_005182145.1 DUF3108 domain-containing protein -
  FSC02_RS02380 (FSC02_02420) - 510615..511298 (-) 684 WP_160255734.1 hypothetical protein -
  FSC02_RS02385 (FSC02_02425) tonB2 511538..512416 (+) 879 WP_005182159.1 energy transducer TonB Machinery gene
  FSC02_RS02390 (FSC02_02430) - 512413..512703 (-) 291 WP_163169943.1 antibiotic biosynthesis monooxygenase family protein -
  FSC02_RS02395 (FSC02_02435) ybeY 512794..513276 (-) 483 WP_163169944.1 rRNA maturation RNase YbeY -
  FSC02_RS02400 (FSC02_02440) - 513296..514369 (-) 1074 WP_180192068.1 PhoH family protein -
  FSC02_RS02405 (FSC02_02445) miaB 514411..515865 (-) 1455 WP_104472822.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33024.72 Da        Isoelectric Point: 9.1867

>NTDB_id=390038 FSC02_RS02385 WP_005182159.1 511538..512416(+) (tonB2) [Acinetobacter indicus strain CMG3-2]
MLKKFHFAPLTQQWWKDPLFGTVLTLAALSHLAVLTVQFVMPQQSDAAVKEIAVSLRPSATEIKDADFLAQADQQGSGTF
REAHRMSSDMPAPMIEQSAGDQQLESLERLQQQRELSFEEKVLMTTLSWQKQAAENQRKKALEELNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDVAAGYLEKFRQKVEFYGNRYYPEAAKQQQLAGEVRLMVILNANGGIRAIRLIE
SSGHAMLDEAAKASVRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 879 bp        

>NTDB_id=390038 FSC02_RS02385 WP_005182159.1 511538..512416(+) (tonB2) [Acinetobacter indicus strain CMG3-2]
ATGTTAAAGAAATTTCATTTTGCACCTTTGACGCAGCAGTGGTGGAAAGATCCACTATTTGGCACCGTACTGACGCTGGC
GGCACTTTCGCATCTGGCTGTGTTAACGGTGCAATTTGTCATGCCACAGCAAAGCGATGCCGCGGTCAAGGAAATTGCGG
TCAGCTTAAGGCCAAGTGCCACCGAAATTAAGGACGCCGACTTTTTAGCACAGGCCGACCAGCAGGGTTCTGGCACCTTC
CGGGAAGCGCACCGCATGTCCAGCGATATGCCCGCACCAATGATTGAACAGAGTGCCGGTGATCAGCAGCTGGAAAGTCT
GGAGCGTTTGCAGCAGCAGCGTGAACTGAGCTTTGAAGAAAAAGTGCTAATGACTACCTTAAGCTGGCAAAAGCAGGCGG
CGGAAAACCAGCGTAAAAAAGCGCTAGAAGAATTGAACAGCCAGTTTCAGGCCAAAGCGGCGATGGTGGCCAGTCTAGAA
GCGCAGTATTTACAGCGTCAGCAAAATTTCAGCCGTCAGCAGAAAATTAAAACCGTAGATGGAATTCAGGCCAAGCAGGA
TGTCGCAGCCGGTTATCTGGAAAAATTCCGTCAGAAAGTCGAATTTTATGGTAACCGTTATTATCCGGAAGCGGCCAAGC
AGCAACAGTTGGCCGGTGAGGTGCGTTTAATGGTGATTTTAAATGCCAACGGTGGGATTCGTGCGATTCGTTTAATTGAA
AGCTCGGGGCATGCCATGCTGGATGAAGCTGCCAAGGCTTCTGTGCGTAAAGCTGCTCCTTTTGGTGCCTTTGATGCCAA
GATGAAAGATATTTCCGAGCTACGCATTATCCGGACCTGGCGTTTTGACCCGGCTGAGGCGGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KSY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.344

95.548

0.729

Multiple sequence alignment