Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   F7V86_RS14505 Genome accession   NZ_CP044444
Coordinates   2775149..2775745 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain KC41     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2770149..2780745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7V86_RS14475 - 2770363..2770818 (+) 456 WP_014417614.1 flavodoxin -
  F7V86_RS14480 dapD 2770900..2771610 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  F7V86_RS14485 - 2771681..2772805 (+) 1125 WP_063636606.1 N-acetyldiaminopimelate deacetylase -
  F7V86_RS14490 - 2772866..2773111 (+) 246 WP_003154596.1 YkuS family protein -
  F7V86_RS14495 - 2773145..2773951 (-) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  F7V86_RS14500 - 2774239..2774697 (+) 459 WP_017417682.1 TlpA disulfide reductase family protein -
  F7V86_RS14505 rok 2775149..2775745 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  F7V86_RS14510 - 2775766..2776758 (-) 993 WP_106067852.1 sporulation protein -
  F7V86_RS14515 - 2776904..2777506 (+) 603 WP_106067851.1 molybdenum cofactor guanylyltransferase -
  F7V86_RS14520 - 2777558..2778577 (+) 1020 WP_065180237.1 molybdopterin-synthase adenylyltransferase MoeB -
  F7V86_RS14525 glp 2778595..2779887 (+) 1293 WP_106067850.1 gephyrin-like molybdotransferase Glp -
  F7V86_RS14530 mobB 2779848..2780369 (+) 522 WP_029973679.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=389999 F7V86_RS14505 WP_003154591.1 2775149..2775745(+) (rok) [Bacillus amyloliquefaciens strain KC41]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=389999 F7V86_RS14505 WP_003154591.1 2775149..2775745(+) (rok) [Bacillus amyloliquefaciens strain KC41]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTAAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCGGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATATCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment