Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   F7V86_RS12990 Genome accession   NZ_CP044444
Coordinates   2491179..2491835 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain KC41     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2486179..2496835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7V86_RS12965 oppF 2486711..2487628 (+) 918 WP_017417453.1 oligopeptide ABC transporter ATP-binding protein OppF -
  F7V86_RS12970 - 2487735..2488922 (+) 1188 WP_128974056.1 putative glycoside hydrolase -
  F7V86_RS12975 - 2489040..2489618 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  F7V86_RS12980 spx 2489797..2490192 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  F7V86_RS12985 - 2490247..2490903 (-) 657 WP_014417421.1 TerC family protein -
  F7V86_RS12990 mecA 2491179..2491835 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  F7V86_RS12995 - 2491986..2493146 (+) 1161 WP_151140230.1 competence protein CoiA family protein -
  F7V86_RS13000 pepF 2493374..2495203 (+) 1830 WP_106067880.1 oligoendopeptidase F Regulator
  F7V86_RS20940 - 2495241..2495408 (-) 168 WP_044802813.1 hypothetical protein -
  F7V86_RS13005 spxH 2495694..2496596 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=389994 F7V86_RS12990 WP_003155032.1 2491179..2491835(+) (mecA) [Bacillus amyloliquefaciens strain KC41]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=389994 F7V86_RS12990 WP_003155032.1 2491179..2491835(+) (mecA) [Bacillus amyloliquefaciens strain KC41]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAAGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895


Multiple sequence alignment