Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HLB22_RS00120 Genome accession   NZ_CP053101
Coordinates   29473..30273 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain EDCC5398     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24473..35273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HLB22_RS00105 (HLB22_00105) walK 25135..26961 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  HLB22_RS00110 (HLB22_00110) yycH 26954..28288 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  HLB22_RS00115 (HLB22_00115) yycI 28289..29077 (+) 789 WP_001104176.1 two-component system regulatory protein YycI -
  HLB22_RS00120 (HLB22_00120) vicX 29473..30273 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  HLB22_RS00125 (HLB22_00125) adsA 30499..32817 (+) 2319 WP_000645763.1 LPXTG-anchored adenosine synthase AdsA -
  HLB22_RS00130 (HLB22_00130) rlmH 33185..33664 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HLB22_RS00135 (HLB22_00135) - 33986..35242 (+) 1257 WP_000566670.1 DUF3578 domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=389855 HLB22_RS00120 WP_000088649.1 29473..30273(+) (vicX) [Staphylococcus aureus strain EDCC5398]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=389855 HLB22_RS00120 WP_000088649.1 29473..30273(+) (vicX) [Staphylococcus aureus strain EDCC5398]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCACAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474