Detailed information NTG0389653

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BACIH_RS05540
• Genome accession: NZ_CP044360
• Coordinates: 1054949..1055902 (+)
• Length: 317 a.a.
• NCBI ID: WP_007409125.1
• Uniprot ID: A7Z3B8
• Organism: Bacillus amyloliquefaciens strain V167
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1049949..1060902

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BACIH_RS05510 (BACIH_1092)	argF	1051765..1052790 (+)	1026	WP_150978878.1	ornithine carbamoyltransferase	-
BACIH_RS05515 (BACIH_1093)	-	1052813..1052992 (+)	180	WP_003155070.1	YjzC family protein	-
BACIH_RS05520 (BACIH_1094)	-	1053030..1053215 (-)	186	WP_007409129.1	YjzD family protein	-
BACIH_RS05530 (BACIH_1096)	-	1053476..1054210 (+)	735	WP_012117276.1	hypothetical protein	-
BACIH_RS05535 (BACIH_1097)	-	1054293..1054859 (+)	567	WP_007409126.1	hypothetical protein	-
BACIH_RS05540 (BACIH_1098)	med	1054949..1055902 (+)	954	WP_007409125.1	BMP family ABC transporter substrate-binding protein	Regulator
BACIH_RS05545 (BACIH_1099)	comZ	1055915..1056106 (+)	192	WP_003155061.1	ComZ family protein	Regulator
BACIH_RS05550 (BACIH_1100)	-	1056135..1056353 (-)	219	WP_007409123.1	hypothetical protein	-
BACIH_RS05555 (BACIH_1101)	-	1056520..1057458 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
BACIH_RS05560 (BACIH_1102)	fabF	1057481..1058719 (+)	1239	WP_012117277.1	beta-ketoacyl-ACP synthase II	-
BACIH_RS05565 (BACIH_1103)	-	1058803..1059588 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
BACIH_RS05570 (BACIH_1104)	-	1059762..1060748 (+)	987	WP_012117279.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.99 Da
• Isoelectric Point: 4.6686

>NTDB_id=389653 BACIH_RS05540 WP_007409125.1 1054949..1055902(+) (med) [Bacillus amyloliquefaciens strain V167]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=389653 BACIH_RS05540 WP_007409125.1 1054949..1055902(+) (med) [Bacillus amyloliquefaciens strain V167]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGTACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A7Z3B8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785