Detailed information NTG0389604

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HK408_RS00975
• Genome accession: NZ_CP053079
• Coordinates: 209453..210436 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain K56-43-un
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 204453..215436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HK408_RS00955 (HK408_00955)	dppA	205597..207204 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HK408_RS00960 (HK408_00960)	-	207266..207493 (-)	228	WP_000198576.1	hypothetical protein	-
HK408_RS00965 (HK408_00965)	dppB	207511..208530 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HK408_RS00970 (HK408_00970)	dppC	208540..209442 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HK408_RS00975 (HK408_00975)	amiE	209453..210436 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HK408_RS00980 (HK408_00980)	dppF	210433..211437 (+)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HK408_RS00985 (HK408_00985)	yhjV	211467..212738 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
HK408_RS00990 (HK408_00990)	ldrD	213214..213321 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HK408_RS00995 (HK408_00995)	bcsG	213408..215087 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
HK408_RS01000 (HK408_01000)	bcsF	215084..215275 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=389604 HK408_RS00975 WP_001196477.1 209453..210436(+) (amiE) [Escherichia coli strain K56-43-un]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=389604 HK408_RS00975 WP_001196477.1 209453..210436(+) (amiE) [Escherichia coli strain K56-43-un]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGAAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404