Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   F6Y24_RS18950 Genome accession   NZ_CP044334
Coordinates   4282283..4282684 (+) Length   133 a.a.
NCBI ID   WP_024711139.1    Uniprot ID   A0A855JH23
Organism   Xanthomonas arboricola pv. pruni strain 15-088     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4277283..4287684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6Y24_RS18930 (F6Y24_18930) tsaB 4278506..4279225 (+) 720 WP_043088135.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  F6Y24_RS18935 (F6Y24_18935) - 4279222..4280136 (+) 915 WP_039514649.1 ADP-ribosylglycohydrolase family protein -
  F6Y24_RS18940 (F6Y24_18940) - 4280222..4281097 (-) 876 WP_039514646.1 energy transducer TonB -
  F6Y24_RS18945 (F6Y24_18945) gshB 4281094..4282044 (-) 951 WP_043088136.1 glutathione synthase -
  F6Y24_RS18950 (F6Y24_18950) pilG 4282283..4282684 (+) 402 WP_024711139.1 twitching motility response regulator PilG Regulator
  F6Y24_RS18955 (F6Y24_18955) - 4282702..4283064 (+) 363 WP_024940328.1 response regulator -
  F6Y24_RS18960 (F6Y24_18960) - 4283064..4283594 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  F6Y24_RS18965 (F6Y24_18965) - 4283634..4285670 (+) 2037 WP_016904289.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14681.06 Da        Isoelectric Point: 6.9539

>NTDB_id=389476 F6Y24_RS18950 WP_024711139.1 4282283..4282684(+) (pilG) [Xanthomonas arboricola pv. pruni strain 15-088]
MTENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=389476 F6Y24_RS18950 WP_024711139.1 4282283..4282684(+) (pilG) [Xanthomonas arboricola pv. pruni strain 15-088]
ATGACTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACCGATGGTTTCGAGGCACTGGCCAAGATTG
CCGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCGTTCACACGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A855JH23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment