Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   HHM66_RS05945 Genome accession   NZ_CP053074
Coordinates   1191718..1192197 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1186718..1197197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HHM66_RS05925 (HHM66_05930) - 1187017..1187358 (-) 342 WP_015057667.1 hypothetical protein -
  HHM66_RS05930 (HHM66_05935) - 1187536..1189188 (+) 1653 WP_015057668.1 NFACT family protein -
  HHM66_RS05935 (HHM66_05940) - 1189251..1190498 (-) 1248 WP_003054178.1 CDC27 family protein -
  HHM66_RS05940 (HHM66_05945) - 1190488..1191669 (-) 1182 WP_003059678.1 AI-2E family transporter -
  HHM66_RS05945 (HHM66_05950) mutX 1191718..1192197 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  HHM66_RS05950 (HHM66_05955) - 1192393..1192584 (+) 192 WP_015057669.1 hypothetical protein -
  HHM66_RS05955 (HHM66_05960) - 1192672..1193106 (-) 435 WP_012767129.1 CPBP family intramembrane glutamic endopeptidase -
  HHM66_RS05960 (HHM66_05965) rfbB 1193558..1194601 (-) 1044 WP_003057682.1 dTDP-glucose 4,6-dehydratase -
  HHM66_RS05965 (HHM66_05970) - 1194845..1195438 (-) 594 WP_015057671.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  HHM66_RS05970 (HHM66_05975) rfbA 1195438..1196307 (-) 870 WP_003057684.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=389463 HHM66_RS05945 WP_003058929.1 1191718..1192197(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=389463 HHM66_RS05945 WP_003058929.1 1191718..1192197(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686