Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | LPB220_RS10095 | Genome accession | NZ_CP044230 |
| Coordinates | 1988147..1990576 (-) | Length | 809 a.a. |
| NCBI ID | WP_049485777.1 | Uniprot ID | A0A6I3PDV9 |
| Organism | Streptococcus sp. LPB0220 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1983147..1995576
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPB220_RS10065 (LPB220_10070) | - | 1983578..1984354 (-) | 777 | WP_150906669.1 | NUDIX domain-containing protein | - |
| LPB220_RS10070 (LPB220_10075) | pnuC | 1984355..1985137 (-) | 783 | WP_049498178.1 | nicotinamide riboside transporter PnuC | - |
| LPB220_RS10075 (LPB220_10080) | - | 1985148..1986209 (-) | 1062 | WP_003009019.1 | AAA family ATPase | - |
| LPB220_RS10080 (LPB220_10085) | - | 1986374..1987099 (-) | 726 | WP_037608145.1 | hypothetical protein | - |
| LPB220_RS10085 (LPB220_10090) | - | 1987264..1987671 (-) | 408 | WP_070587783.1 | DUF4430 domain-containing protein | - |
| LPB220_RS10090 (LPB220_10095) | - | 1987649..1988137 (-) | 489 | WP_118096111.1 | ECF transporter S component | - |
| LPB220_RS10095 (LPB220_10100) | clpC | 1988147..1990576 (-) | 2430 | WP_049485777.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| LPB220_RS10100 (LPB220_10105) | - | 1990577..1991041 (-) | 465 | WP_049472688.1 | CtsR family transcriptional regulator | - |
| LPB220_RS10105 (LPB220_10110) | - | 1991258..1994968 (-) | 3711 | WP_150906671.1 | alpha-L-fucosidase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89684.17 Da Isoelectric Point: 5.4184
>NTDB_id=389011 LPB220_RS10095 WP_049485777.1 1988147..1990576(-) (clpC) [Streptococcus sp. LPB0220]
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=389011 LPB220_RS10095 WP_049485777.1 1988147..1990576(-) (clpC) [Streptococcus sp. LPB0220]
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAACACGCAAGAGAGATTGCCCAGGTTCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGAACCTTGGCGAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCCCTTCGCAAGAATTTAGAAGACAAAGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTCTATCGGGCCCAAAACCCCAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATCTGACAGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATTGGCCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGAAAA
ACCGCTCTTGCATTAGGTCTGGCCCAGCGGGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCGCAAATGCGTGTCTTAGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGGGACTTCGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACTATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGGGGAACCTTGCGTACAGTTGGGGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACTTATCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACTAGTCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCCGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCATAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCTATTCGACGCAATCAATCGGGGA
TCCGTAGCAACAAGCGTCCGATCGGTTCTTTCATGTTCTTAGGACCTACCGGTGTCGGAAAAACAGAGCTAGCCAAAGCT
TTGGCGGAAGTTTTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCCAG
CCGCCTCAACGGAGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCATCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATCGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCTACAGC
CCTTCGGGATGATAAGACCGTTGGCTTTGGTGCCAAAGATATCCGCTTTGACCAAGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTAGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGGCATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAACTAGCAGAGCTATTGCTGAAAGGCCAAGCCCAAGAAGGACAAACGATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTTGAGATTGTCTAG
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAACACGCAAGAGAGATTGCCCAGGTTCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGAACCTTGGCGAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCCCTTCGCAAGAATTTAGAAGACAAAGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTCTATCGGGCCCAAAACCCCAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATCTGACAGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATTGGCCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGAAAA
ACCGCTCTTGCATTAGGTCTGGCCCAGCGGGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCGCAAATGCGTGTCTTAGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGGGACTTCGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACTATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGGGGAACCTTGCGTACAGTTGGGGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACTTATCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACTAGTCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCCGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCATAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCTATTCGACGCAATCAATCGGGGA
TCCGTAGCAACAAGCGTCCGATCGGTTCTTTCATGTTCTTAGGACCTACCGGTGTCGGAAAAACAGAGCTAGCCAAAGCT
TTGGCGGAAGTTTTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCCAG
CCGCCTCAACGGAGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCATCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATCGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCTACAGC
CCTTCGGGATGATAAGACCGTTGGCTTTGGTGCCAAAGATATCCGCTTTGACCAAGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTAGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGGCATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAACTAGCAGAGCTATTGCTGAAAGGCCAAGCCCAAGAAGGACAAACGATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTTGAGATTGTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus pneumoniae Rx1 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus pneumoniae D39 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus mutans UA159 |
66.218 |
100 |
0.669 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.742 |
100 |
0.651 |
| clpC | Streptococcus thermophilus LMD-9 |
64.742 |
100 |
0.651 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.601 |
100 |
0.52 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.238 |
98.64 |
0.446 |
| clpE | Streptococcus mutans UA159 |
47.687 |
77.503 |
0.37 |
| clpE | Streptococcus pneumoniae Rx1 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.763 |
80.222 |
0.367 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.625 |
79.11 |
0.361 |