Detailed information NTG0388837

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: F5989_RS05235
• Genome accession: NZ_CP044221
• Coordinates: 1070011..1071063 (-)
• Length: 350 a.a.
• NCBI ID: WP_002289581.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain NCH105
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1065011..1076063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F5989_RS05215 (F5989_05300)	ptcA	1065406..1066425 (-)	1020	WP_002282737.1	putrescine carbamoyltransferase	-
F5989_RS05220 (F5989_05305)	-	1066664..1067629 (+)	966	WP_002263993.1	helix-turn-helix transcriptional regulator	-
F5989_RS05225 (F5989_05310)	-	1067846..1068448 (-)	603	WP_002273611.1	nitroreductase family protein	-
F5989_RS05230 (F5989_05315)	amiF	1069092..1070018 (-)	927	WP_002267002.1	ABC transporter ATP-binding protein	Regulator
F5989_RS05235 (F5989_05320)	oppD	1070011..1071063 (-)	1053	WP_002289581.1	ABC transporter ATP-binding protein	Regulator
F5989_RS05240 (F5989_05325)	-	1071073..1072104 (-)	1032	WP_002263989.1	ABC transporter permease	-
F5989_RS05245 (F5989_05330)	-	1072115..1073029 (-)	915	WP_002262739.1	ABC transporter permease	-
F5989_RS05250 (F5989_05335)	-	1073135..1074784 (-)	1650	WP_002265823.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 39102.62 Da
• Isoelectric Point: 5.7541

>NTDB_id=388837 F5989_RS05235 WP_002289581.1 1070011..1071063(-) (oppD) [Streptococcus mutans strain NCH105]
MGKEKILQVNNLHVNFHTYAGEVKAIRDVSFYLEKGETLAIVGESGSGKSVTTRTLMGLSAKNAEIFGDIEFKGRNLNDL
KEEDWVHIRGNDISMIFQDPMTSLDPTMRIGLQIAEPIIKHEKVTKKEALKRALDMMEKVGIPNAQEHINDYPHQWSGGM
RQRAVIAIALATNPEILIADEPTTALDVTIQAQILHLMKEIQKNTDSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTNTASGSLHSIPGTPPDLLQPPQGDAFAPRNEFALDIDLKEEPPFFKVSDSHYAATWLL
DDRAPKITPPERILQRWGKWKSLQGEKHND

Nucleotide

• Length: 1053 bp

>NTDB_id=388837 F5989_RS05235 WP_002289581.1 1070011..1071063(-) (oppD) [Streptococcus mutans strain NCH105]
ATGGGTAAGGAAAAAATTTTACAAGTCAATAACCTCCATGTCAATTTTCATACCTATGCAGGTGAAGTAAAAGCTATTCG
CGATGTTAGTTTTTATTTAGAAAAAGGGGAAACGCTGGCTATTGTTGGCGAATCTGGTTCTGGAAAGTCGGTAACCACAC
GAACTTTAATGGGGTTGTCAGCAAAGAATGCTGAGATTTTCGGAGATATTGAGTTTAAGGGACGCAATCTAAATGATTTG
AAGGAAGAAGACTGGGTTCATATTCGCGGAAATGATATTTCCATGATTTTCCAAGATCCTATGACAAGTTTGGATCCAAC
CATGCGTATTGGCCTTCAAATTGCTGAACCTATTATCAAGCATGAAAAAGTAACTAAAAAAGAAGCTCTCAAGCGGGCTC
TTGACATGATGGAAAAGGTTGGTATTCCCAATGCGCAAGAACACATCAACGATTATCCTCATCAGTGGTCAGGCGGTATG
CGCCAGCGCGCTGTCATAGCTATTGCTTTGGCAACTAATCCTGAAATCCTTATTGCAGATGAACCAACGACGGCTCTTGA
TGTTACCATTCAAGCACAAATTCTTCATTTAATGAAAGAAATCCAAAAGAATACTGACTCTTCCATTATCTTTATCACTC
ATGATTTGGGTGTCGTTGCAGGTATGGCAGACCGTGTTGCTGTTATGTATGCAGGCAAGATTGTGGAATATGGTACAGTA
GATGAGGTTTTCTACAACCCACAGCATCCCTACACTTGGGGGCTTCTCAATTCGATGCCTACAACTAATACAGCTTCAGG
CAGTTTGCATTCAATTCCCGGAACACCGCCTGACTTGTTGCAGCCCCCTCAAGGAGATGCTTTTGCTCCAAGAAATGAAT
TCGCTCTTGATATTGATCTTAAGGAGGAGCCGCCATTTTTTAAAGTTAGTGATTCACATTATGCTGCTACTTGGCTGTTA
GATGATCGTGCTCCTAAGATTACTCCGCCGGAAAGAATTTTGCAGCGTTGGGGAAAATGGAAGAGCTTACAGGGAGAAAA
GCATAATGACTGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	98.857	100	0.989
amiE	Streptococcus salivarius strain HSISS4	54.885	99.429	0.546
amiE	Streptococcus thermophilus LMG 18311	55.072	98.571	0.543
amiE	Streptococcus thermophilus LMD-9	55.072	98.571	0.543