Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   F6O44_RS07825 Genome accession   NZ_CP044214
Coordinates   1575382..1576005 (-) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain KA_P10_L5_03.19     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1570382..1581005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6O44_RS07810 (F6O44_07810) helD 1570617..1572671 (-) 2055 WP_047739914.1 DNA helicase IV -
  F6O44_RS07815 (F6O44_07815) - 1572795..1573241 (+) 447 WP_020079238.1 YccF domain-containing protein -
  F6O44_RS07820 (F6O44_07820) yccS 1573259..1575394 (+) 2136 WP_015367427.1 YccS family putative transporter -
  F6O44_RS07825 (F6O44_07825) sxy/tfoX 1575382..1576005 (-) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  F6O44_RS07830 (F6O44_07830) sulA 1576455..1576964 (+) 510 WP_020079240.1 SOS-induced cell division inhibitor SulA -
  F6O44_RS07835 (F6O44_07835) ompA 1577317..1578369 (+) 1053 WP_080473199.1 porin OmpA -
  F6O44_RS07840 (F6O44_07840) matP 1578461..1578913 (-) 453 WP_015367432.1 macrodomain Ter protein MatP -
  F6O44_RS07845 (F6O44_07845) - 1579099..1580856 (+) 1758 WP_032711302.1 AAA family ATPase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=388785 F6O44_RS07825 WP_026612357.1 1575382..1576005(-) (sxy/tfoX) [Klebsiella aerogenes strain KA_P10_L5_03.19]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=388785 F6O44_RS07825 WP_026612357.1 1575382..1576005(-) (sxy/tfoX) [Klebsiella aerogenes strain KA_P10_L5_03.19]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493

Multiple sequence alignment