Detailed information NTG0388741

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: F6X00_RS05320
• Genome accession: NZ_CP044206
• Coordinates: 1122848..1123855 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain Vv180806
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1117848..1128855

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6X00_RS05290 (F6X00_05395)	zapB	1117972..1118214 (-)	243	WP_011079328.1	cell division protein ZapB	-
F6X00_RS05295 (F6X00_05400)	rraA	1118436..1118957 (-)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
F6X00_RS05300 (F6X00_05405)	-	1119033..1119950 (-)	918	WP_182290566.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
F6X00_RS05305 (F6X00_05410)	hslU	1120116..1121447 (-)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
F6X00_RS05310 (F6X00_05415)	hslV	1121475..1122029 (-)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
F6X00_RS05315 (F6X00_05420)	-	1122181..1122738 (-)	558	WP_011151294.1	SPOR domain-containing protein	-
F6X00_RS05320 (F6X00_05425)	cytR	1122848..1123855 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
F6X00_RS05325 (F6X00_05430)	priA	1124084..1126288 (-)	2205	WP_182290810.1	primosomal protein N'	-
F6X00_RS05330 (F6X00_05435)	rpmE	1126569..1126790 (+)	222	WP_011151292.1	50S ribosomal protein L31	-
F6X00_RS05335 (F6X00_05440)	-	1127069..1128346 (+)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
F6X00_RS05340 (F6X00_05445)	metJ	1128433..1128750 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=388741 F6X00_RS05320 WP_011079334.1 1122848..1123855(-) (cytR) [Vibrio vulnificus strain Vv180806]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=388741 F6X00_RS05320 WP_011079334.1 1122848..1123855(-) (cytR) [Vibrio vulnificus strain Vv180806]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCAGTGTTGGAAGCTGGTTATTCCCCAAACTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTGTTGCTCGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCAGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATTT
GTCGATTGTCGGCTTCGATGACATTCAGTTTGCCCAATATTGCGATCCTCCACTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCAGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875