Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   F4V25_RS01875 Genome accession   NZ_CP044171
Coordinates   290124..291308 (-) Length   394 a.a.
NCBI ID   WP_014517095.1    Uniprot ID   A0A0E1EUG9
Organism   Campylobacter jejuni strain AR-0413     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 285124..296308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F4V25_RS01850 fliL 286272..286808 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  F4V25_RS01855 acpS 286808..287155 (+) 348 WP_002825806.1 holo-ACP synthase -
  F4V25_RS01860 - 287156..287575 (-) 420 WP_002880391.1 hypothetical protein -
  F4V25_RS01865 - 287572..288933 (-) 1362 WP_014517093.1 cytochrome P450 -
  F4V25_RS01870 - 288930..290051 (-) 1122 WP_014517094.1 membrane protein -
  F4V25_RS01875 kpsS 290124..291308 (-) 1185 WP_014517095.1 capsule polysaccharide modification protein KpsS Regulator
  F4V25_RS01880 - 291305..292402 (-) 1098 Protein_279 capsular polysaccharide biosynthesis protein -
  F4V25_RS01890 - 292623..293114 (-) 492 WP_014517098.1 hypothetical protein -
  F4V25_RS01895 - 293267..293639 (-) 373 Protein_281 alpha-2,3-sialyltransferase -
  F4V25_RS09110 - 293812..293952 (-) 141 WP_153610262.1 hypothetical protein -
  F4V25_RS01900 - 294652..295938 (+) 1287 WP_014517100.1 FAD-dependent oxidoreductase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46775.47 Da        Isoelectric Point: 9.8987

>NTDB_id=388514 F4V25_RS01875 WP_014517095.1 290124..291308(-) (kpsS) [Campylobacter jejuni strain AR-0413]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLSMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYKDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEVWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQSIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=388514 F4V25_RS01875 WP_014517095.1 290124..291308(-) (kpsS) [Campylobacter jejuni strain AR-0413]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTTCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACAAGGTGTAAATGTGATGAAAAAGATCTTGAAAATTTCTATAAAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAGT
ATGGATTTTTGAGGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAGTATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGTAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAATCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAACGATTTAAGTCAAAAATATCATGTAG
AGGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTGTGTAATTTTAAGA
AATATCTTTTACAAACTAACCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E1EUG9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.462

100

0.975


Multiple sequence alignment