Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | HIN89_RS14625 | Genome accession | NZ_CP051862 |
| Coordinates | 3090831..3091346 (+) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain Ab-C102 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3085831..3096346
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HIN89_RS14605 (HIN89_14610) | - | 3086177..3087637 (+) | 1461 | WP_032059048.1 | amino acid permease | - |
| HIN89_RS14610 (HIN89_14615) | - | 3087913..3089118 (+) | 1206 | WP_000512701.1 | RtcB family protein | - |
| HIN89_RS14615 (HIN89_14620) | - | 3089137..3089280 (+) | 144 | WP_162541494.1 | hypothetical protein | - |
| HIN89_RS14620 (HIN89_14625) | omp38 | 3089405..3090448 (-) | 1044 | WP_000777884.1 | outer membrane protein Omp38 | - |
| HIN89_RS14625 (HIN89_14630) | fimT | 3090831..3091346 (+) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| HIN89_RS14630 (HIN89_14635) | - | 3091455..3092630 (+) | 1176 | WP_000129968.1 | thiolase family protein | - |
| HIN89_RS14635 (HIN89_14640) | - | 3092757..3093200 (+) | 444 | WP_001176583.1 | VOC family protein | - |
| HIN89_RS14640 (HIN89_14645) | - | 3093243..3093596 (-) | 354 | WP_000457783.1 | DMT family transporter | - |
| HIN89_RS14645 (HIN89_14650) | - | 3093679..3094164 (-) | 486 | WP_000935246.1 | DUF934 domain-containing protein | - |
| HIN89_RS14650 (HIN89_14655) | - | 3094157..3095800 (-) | 1644 | WP_000281767.1 | nitrite/sulfite reductase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=388431 HIN89_RS14625 WP_000477151.1 3090831..3091346(+) (fimT) [Acinetobacter baumannii strain Ab-C102]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=388431 HIN89_RS14625 WP_000477151.1 3090831..3091346(+) (fimT) [Acinetobacter baumannii strain Ab-C102]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |