Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   F4V31_RS00735 Genome accession   NZ_CP044162
Coordinates   148003..148971 (+) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni strain AR-0419     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 143003..153971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F4V31_RS00710 cdsA 143913..144638 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  F4V31_RS00715 - 144647..144985 (-) 339 WP_002852397.1 hypothetical protein -
  F4V31_RS00720 - 144987..146294 (-) 1308 WP_002927448.1 NFACT family protein -
  F4V31_RS00725 mobA 146357..146932 (+) 576 WP_002853737.1 molybdenum cofactor guanylyltransferase -
  F4V31_RS00730 pldA 146929..147917 (+) 989 Protein_140 phospholipase A -
  F4V31_RS00735 ceuB 148003..148971 (+) 969 WP_002872671.1 ABC transporter permease Machinery gene
  F4V31_RS00740 ceuC 148964..149902 (+) 939 WP_002927446.1 iron chelate uptake ABC transporter family permease subunit -
  F4V31_RS00745 ceuD 149899..150654 (+) 756 WP_002927445.1 ABC transporter ATP-binding protein -
  F4V31_RS00750 ceuB 150667..151659 (+) 993 WP_002927444.1 enterochelin ABC transporter substrate-binding protein CeuB -
  F4V31_RS00760 - 151885..152439 (-) 555 WP_002927443.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=388429 F4V31_RS00735 WP_002872671.1 148003..148971(+) (ceuB) [Campylobacter jejuni strain AR-0419]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=388429 F4V31_RS00735 WP_002872671.1 148003..148971(+) (ceuB) [Campylobacter jejuni strain AR-0419]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGGGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment