Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   HIR76_RS09835 Genome accession   NZ_CP051860
Coordinates   1949339..1949956 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1944339..1954956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HIR76_RS09810 (HIR76_17800) yndJ 1944653..1946293 (+) 1641 WP_003231612.1 YndJ family protein -
  HIR76_RS09815 (HIR76_17795) - 1946381..1946695 (+) 315 WP_003245621.1 hypothetical protein -
  HIR76_RS09820 (HIR76_17790) pghL 1946921..1947679 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  HIR76_RS09825 (HIR76_17785) - 1947706..1948155 (-) 450 WP_003245454.1 YndM family protein -
  HIR76_RS09830 (HIR76_17780) fosM 1948363..1948797 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  HIR76_RS22130 - 1948706..1949002 (+) 297 WP_223257629.1 hypothetical protein -
  HIR76_RS09835 (HIR76_17775) dinR/lexA 1949339..1949956 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  HIR76_RS09840 (HIR76_17770) yneA 1950106..1950423 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  HIR76_RS09845 (HIR76_17765) dinL 1950442..1951095 (+) 654 WP_003231596.1 recombinase family protein -
  HIR76_RS09850 (HIR76_17760) ynzC 1951159..1951392 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  HIR76_RS09855 (HIR76_17755) recP/tkt 1951561..1953564 (+) 2004 WP_003245397.1 transketolase Machinery gene
  HIR76_RS09860 (HIR76_17750) sirA 1953717..1954163 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  HIR76_RS09865 (HIR76_17745) yneF 1954249..1954467 (+) 219 WP_003221221.1 YneF family protein -
  HIR76_RS09870 (HIR76_17740) ynzD 1954541..1954714 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=388298 HIR76_RS09835 WP_003238209.1 1949339..1949956(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis str. 168]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=388298 HIR76_RS09835 WP_003238209.1 1949339..1949956(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis str. 168]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1