Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   F3129_RS20155 Genome accession   NZ_CP044133
Coordinates   348968..349132 (+) Length   54 a.a.
NCBI ID   WP_318526404.1    Uniprot ID   -
Organism   Bacillus velezensis strain FJAT-46737     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 343968..354132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3129_RS20475 - 346433..346723 (+) 291 WP_404841217.1 hypothetical protein -
  F3129_RS20150 - 346801..348951 (+) 2151 Protein_316 non-ribosomal peptide synthetase -
  F3129_RS20155 comS 348968..349132 (+) 165 WP_318526404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6213.26 Da        Isoelectric Point: 12.0559

>NTDB_id=388210 F3129_RS20155 WP_318526404.1 348968..349132(+) (comS) [Bacillus velezensis strain FJAT-46737]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTFLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=388210 F3129_RS20155 WP_318526404.1 348968..349132(+) (comS) [Bacillus velezensis strain FJAT-46737]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTTCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

59.091

81.481

0.481

Multiple sequence alignment