Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   F3129_RS07650 Genome accession   NZ_CP044133
Coordinates   1455492..1456088 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain FJAT-46737     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1450492..1461088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3129_RS07620 (F3129_07620) - 1450704..1451159 (+) 456 WP_007409622.1 flavodoxin -
  F3129_RS07625 (F3129_07625) dapD 1451241..1451951 (+) 711 WP_012117443.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  F3129_RS07630 (F3129_07630) - 1452022..1453146 (+) 1125 WP_046702332.1 N-acetyldiaminopimelate deacetylase -
  F3129_RS07635 (F3129_07635) - 1453207..1453452 (+) 246 WP_003154596.1 YkuS family protein -
  F3129_RS07640 (F3129_07640) - 1453486..1454292 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  F3129_RS07645 (F3129_07645) - 1454581..1455039 (+) 459 WP_072589040.1 TlpA disulfide reductase family protein -
  F3129_RS07650 (F3129_07650) rok 1455492..1456088 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  F3129_RS07655 (F3129_07655) - 1456112..1457104 (-) 993 WP_043021218.1 hypothetical protein -
  F3129_RS07660 (F3129_07660) - 1457250..1457852 (+) 603 WP_052827374.1 molybdenum cofactor guanylyltransferase -
  F3129_RS07665 (F3129_07665) - 1457904..1458923 (+) 1020 WP_072589041.1 molybdopterin-synthase adenylyltransferase MoeB -
  F3129_RS07670 (F3129_07670) glp 1458941..1460233 (+) 1293 WP_059367088.1 gephyrin-like molybdotransferase Glp -
  F3129_RS07675 (F3129_07675) mobB 1460194..1460715 (+) 522 WP_150941183.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=388164 F3129_RS07650 WP_012117447.1 1455492..1456088(+) (rok) [Bacillus velezensis strain FJAT-46737]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=388164 F3129_RS07650 WP_012117447.1 1455492..1456088(+) (rok) [Bacillus velezensis strain FJAT-46737]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTTCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment