Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   F3129_RS05850 Genome accession   NZ_CP044133
Coordinates   1134167..1134358 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain FJAT-46737     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1129167..1139358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3129_RS05815 (F3129_05815) argF 1130019..1130990 (+) 972 WP_150941115.1 ornithine carbamoyltransferase -
  F3129_RS05820 (F3129_05820) - 1131066..1131245 (+) 180 WP_003155070.1 YjzC family protein -
  F3129_RS05825 (F3129_05825) - 1131282..1131467 (-) 186 WP_007409129.1 YjzD family protein -
  F3129_RS05835 (F3129_05835) - 1131728..1132462 (+) 735 WP_072588979.1 hypothetical protein -
  F3129_RS05840 (F3129_05840) - 1132545..1133111 (+) 567 WP_007409126.1 hypothetical protein -
  F3129_RS05845 (F3129_05845) med 1133201..1134154 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  F3129_RS05850 (F3129_05850) comZ 1134167..1134358 (+) 192 WP_003155061.1 ComZ family protein Regulator
  F3129_RS05855 (F3129_05855) - 1134387..1134605 (-) 219 WP_007409123.1 hypothetical protein -
  F3129_RS05860 (F3129_05860) - 1134772..1135710 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  F3129_RS05865 (F3129_05865) fabF 1135733..1136971 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  F3129_RS05870 (F3129_05870) - 1137054..1137839 (+) 786 WP_150941116.1 DUF2268 domain-containing protein -
  F3129_RS05875 (F3129_05875) - 1138013..1138999 (+) 987 WP_012117279.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=388156 F3129_RS05850 WP_003155061.1 1134167..1134358(+) (comZ) [Bacillus velezensis strain FJAT-46737]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=388156 F3129_RS05850 WP_003155061.1 1134167..1134358(+) (comZ) [Bacillus velezensis strain FJAT-46737]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCTAAGGCAGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment