Detailed information NTG0038809

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BATR1942_RS17840
• Genome accession: NC_014639
• Coordinates: 3631902..3633014 (+)
• Length: 370 a.a.
• NCBI ID: WP_003326033.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus 1942
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3626902..3638014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BATR1942_RS17815 (BATR1942_18605)	rnpA	3627604..3627951 (-)	348	WP_003326040.1	ribonuclease P protein component	-
BATR1942_RS17820 (BATR1942_18610)	rpmH	3628111..3628245 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
BATR1942_RS17825 (BATR1942_18615)	dnaA	3628876..3630216 (+)	1341	WP_003326038.1	chromosomal replication initiator protein DnaA	-
BATR1942_RS17830 (BATR1942_18620)	dnaN	3630398..3631534 (+)	1137	WP_003326036.1	DNA polymerase III subunit beta	-
BATR1942_RS17835 (BATR1942_18625)	rlbA	3631671..3631886 (+)	216	WP_003326035.1	ribosome maturation protein RlbA	-
BATR1942_RS17840 (BATR1942_18630)	recF	3631902..3633014 (+)	1113	WP_003326033.1	DNA replication/repair protein RecF	Machinery gene
BATR1942_RS17845 (BATR1942_18635)	remB	3633032..3633277 (+)	246	WP_003326032.1	extracellular matrix regulator RemB	-
BATR1942_RS17850 (BATR1942_18640)	gyrB	3633334..3635250 (+)	1917	WP_003326031.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BATR1942_RS17855 (BATR1942_18645)	gyrA	3635478..3637943 (+)	2466	WP_010790566.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42482.53 Da
• Isoelectric Point: 7.6570

>NTDB_id=38809 BATR1942_RS17840 WP_003326033.1 3631902..3633014(+) (recF) [Bacillus atrophaeus 1942]
MYIQNLELTSYRNYERVELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGS
IPMQLVISKKGKKGKVNHIEQQKLSRYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLYDLSLYQKILTQR
NHFLKQLQSRKQTDQTMLDVLTEQLIETAAKVVVKRLQFTAQLEKWAQPIHSGISRGLEELTLKYQTALEVSDPEDLSKI
GDSYQRAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLHQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=38809 BATR1942_RS17840 WP_003326033.1 3631902..3633014(+) (recF) [Bacillus atrophaeus 1942]
TTGTATATCCAAAATTTGGAATTAACGTCTTATCGTAATTACGAGCGTGTTGAACTTCAATTTGAAAATAAAGTGAATGT
CATCATCGGTGAGAACGCTCAAGGGAAGACAAATCTCATGGAAGCGATCTATGTTTTGTCGATGGCGAAATCACATCGCA
CGTCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGTCG
ATCCCGATGCAGCTTGTCATTTCCAAGAAGGGGAAAAAGGGCAAGGTCAATCATATCGAACAGCAAAAACTGAGCCGGTA
TGTAGGAGCGCTGAATACAATTATGTTCGCGCCCGAGGACTTAAATCTCGTAAAGGGCAGCCCGCAAGTAAGACGGCGGT
TTCTTGACATGGAAATCGGCCAGGTATCTCCAGTCTATTTGTACGATCTTTCTCTGTACCAGAAAATTCTTACGCAAAGA
AATCATTTTTTGAAACAGCTGCAAAGCAGGAAACAGACTGACCAGACAATGCTCGACGTTCTGACTGAACAGCTGATCGA
GACAGCTGCAAAGGTTGTCGTAAAACGCCTGCAATTTACAGCGCAGCTTGAAAAATGGGCGCAGCCGATCCATTCGGGAA
TTTCAAGAGGGCTTGAAGAACTGACGCTGAAGTATCAGACGGCTCTTGAGGTATCAGATCCCGAAGACTTGTCGAAAATA
GGAGATAGTTACCAAAGGGCGTTTTCAAAGCTAAGAGAAAAAGAAATTGAGCGTGGTGTAACGCTGTCAGGACCTCATCG
GGATGATGTTCTTTTTTATGTGAACGGACGCGATGTGCAAACATATGGTTCTCAGGGGCAGCAGCGGACAACGGCATTGT
CACTCAAGCTGGCGGAAATTGACTTGATTCATGAAGAAATCGGAGAATACCCTATCTTACTTTTGGATGATGTGCTGAGT
GAGCTGGATGACTATCGGCAGTCGCATTTGCTTCATACGATCCAAGGCCGTGTTCAAACGTTTGTCACTACGACAAGTGT
AGATGGCATTGATCACGAAACCTTACATCAAGCAGGAATGTTCCGTGTGCAAAACGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	95.135	100	0.951