Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   F5K02_RS01845 Genome accession   NZ_CP044132
Coordinates   388566..388730 (+) Length   54 a.a.
NCBI ID   WP_269195032.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ZKY01     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 383566..393730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5K02_RS01840 srfAB 385457..388549 (+) 3093 Protein_322 surfactin non-ribosomal peptide synthetase SrfAB -
  F5K02_RS01845 comS 388566..388730 (+) 165 WP_269195032.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6180.18 Da        Isoelectric Point: 12.0559

>NTDB_id=388069 F5K02_RS01845 WP_269195032.1 388566..388730(+) (comS) [Bacillus amyloliquefaciens strain ZKY01]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=388069 F5K02_RS01845 WP_269195032.1 388566..388730(+) (comS) [Bacillus amyloliquefaciens strain ZKY01]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5

Multiple sequence alignment