Detailed information NTG0388036

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ21_RS20905
• Genome accession: NZ_CP051753
• Coordinates: 4421981..4422964 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196479.1
• Uniprot ID: -
• Organism: Escherichia coli strain SCU-102
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4416981..4427964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ21_RS20885 (HHJ21_20880)	ldrD	4418613..4418720 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ21_RS20890 (HHJ21_20885)	-	4419096..4419203 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ21_RS20895 (HHJ21_20890)	yhjV	4419679..4420950 (+)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
HHJ21_RS20900 (HHJ21_20895)	dppF	4420980..4421984 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ21_RS20905 (HHJ21_20900)	amiE	4421981..4422964 (-)	984	WP_001196479.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ21_RS20910 (HHJ21_20905)	dppC	4422975..4423877 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ21_RS20915 (HHJ21_20910)	dppB	4423887..4424906 (-)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
HHJ21_RS20920 (HHJ21_20915)	dppA	4425057..4426664 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35836.42 Da
• Isoelectric Point: 6.6877

>NTDB_id=388036 HHJ21_RS20905 WP_001196479.1 4421981..4422964(-) (amiE) [Escherichia coli strain SCU-102]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFRAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=388036 HHJ21_RS20905 WP_001196479.1 4421981..4422964(-) (amiE) [Escherichia coli strain SCU-102]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAACTGGAGTTCAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGTCGCAACCTGGTAGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGAATGAGCCAG
CGTGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGTTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGATC
TGGCTCTGGTGGCGGAAGCGGCGCATAAAATCATTGTGATGTATGCCGGTCAAGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCGTGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTACCTGGCGTCGTTCCCGGCAAGTATGACCGCCCGAATGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407