Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FOB50_RS19490 Genome accession   NZ_CP044107
Coordinates   4084939..4085565 (-) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain FDAARGOS_642     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4079939..4090565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB50_RS19475 (FOB50_19480) helD 4080178..4082232 (-) 2055 WP_017384802.1 DNA helicase IV -
  FOB50_RS19480 (FOB50_19485) - 4082355..4082801 (+) 447 WP_003858149.1 YccF domain-containing protein -
  FOB50_RS19485 (FOB50_19490) yccS 4082820..4084982 (+) 2163 WP_017384803.1 YccS family putative transporter -
  FOB50_RS19490 (FOB50_19495) sxy/tfoX 4084939..4085565 (-) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  FOB50_RS19495 (FOB50_19500) sulA 4085783..4086292 (+) 510 WP_026080726.1 SOS-induced cell division inhibitor SulA -
  FOB50_RS19500 (FOB50_19505) ompA 4086649..4087701 (+) 1053 WP_017694761.1 porin OmpA -
  FOB50_RS19505 (FOB50_19510) matP 4087767..4088219 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  FOB50_RS19510 (FOB50_19515) - 4088406..4090166 (+) 1761 WP_017384808.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=387962 FOB50_RS19490 WP_017384804.1 4084939..4085565(-) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS_642]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=387962 FOB50_RS19490 WP_017384804.1 4084939..4085565(-) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS_642]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTAACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATTCGGGTATTGTTCGCGCTTGAAGGCGCCATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment