Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FOB62_RS07565 Genome accession   NZ_CP044102
Coordinates   1491551..1492276 (+) Length   241 a.a.
NCBI ID   WP_003057032.1    Uniprot ID   A0A9X5LWD8
Organism   Streptococcus dysgalactiae strain FDAARGOS_654     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1486551..1497276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB62_RS07535 (FOB62_07540) - 1486702..1488162 (+) 1461 WP_012767496.1 NCS2 family permease -
  FOB62_RS07540 (FOB62_07545) tsaE 1488339..1488782 (+) 444 WP_014612541.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FOB62_RS07545 (FOB62_07550) - 1488775..1489296 (+) 522 WP_003057063.1 GNAT family N-acetyltransferase -
  FOB62_RS07550 (FOB62_07555) - 1489308..1490576 (+) 1269 WP_015058007.1 LCP family protein -
  FOB62_RS07555 (FOB62_07560) - 1490734..1491063 (-) 330 WP_003057072.1 hypothetical protein -
  FOB62_RS07560 (FOB62_07565) - 1491060..1491479 (-) 420 WP_012767493.1 HIT family protein -
  FOB62_RS07565 (FOB62_07570) pptA 1491551..1492276 (+) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  FOB62_RS07570 (FOB62_07575) - 1492279..1493313 (+) 1035 WP_003062324.1 ABC transporter permease -
  FOB62_RS07575 (FOB62_07580) - 1493378..1494169 (+) 792 WP_003052472.1 phosphotransferase family protein -
  FOB62_RS07580 (FOB62_07585) trmB 1494169..1494804 (+) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FOB62_RS07590 (FOB62_07595) rimP 1495287..1495781 (+) 495 WP_044022604.1 ribosome maturation factor RimP -
  FOB62_RS07595 (FOB62_07600) nusA 1495924..1497081 (+) 1158 WP_003057051.1 transcription termination factor NusA -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26416.65 Da        Isoelectric Point: 4.6450

>NTDB_id=387888 FOB62_RS07565 WP_003057032.1 1491551..1492276(+) (pptA) [Streptococcus dysgalactiae strain FDAARGOS_654]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLTADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKGKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=387888 FOB62_RS07565 WP_003057032.1 1491551..1492276(+) (pptA) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATTTCGATTGATGGACTAACCTTGACTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGATGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGGCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCCTTTGGTGATGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747
  pptA Streptococcus thermophilus LMD-9

74.477

99.17

0.739

Multiple sequence alignment