Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NMBG2136_RS10485 Genome accession   NC_017513
Coordinates   2011482..2012450 (+) Length   322 a.a.
NCBI ID   WP_014580873.1    Uniprot ID   -
Organism   Neisseria meningitidis G2136     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2006482..2017450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBG2136_RS14590 - 2006566..2006712 (-) 147 WP_002240086.1 hypothetical protein -
  NMBG2136_RS10475 (NMBG2136_1880) fetA 2007474..2009654 (+) 2181 WP_014580871.1 TonB-dependent siderophore receptor FetA/FrpB -
  NMBG2136_RS10480 (NMBG2136_1881) - 2010353..2011318 (+) 966 WP_014580872.1 siderophore ABC transporter substrate-binding protein -
  NMBG2136_RS14745 - 2011336..2011485 (+) 150 WP_162051164.1 hypothetical protein -
  NMBG2136_RS10485 (NMBG2136_1882) ceuB 2011482..2012450 (+) 969 WP_014580873.1 ABC transporter permease Machinery gene
  NMBG2136_RS10490 (NMBG2136_1883) - 2012440..2013414 (+) 975 WP_014580874.1 iron chelate uptake ABC transporter family permease subunit -
  NMBG2136_RS10495 (NMBG2136_1884) - 2013459..2014085 (+) 627 WP_002226766.1 FmdE family protein -
  NMBG2136_RS10500 (NMBG2136_1885) - 2014168..2014926 (+) 759 WP_002226767.1 ABC transporter ATP-binding protein -
  NMBG2136_RS10505 (NMBG2136_1886) - 2015242..2016459 (+) 1218 WP_002246495.1 YadA-like family protein -
  NMBG2136_RS10510 (NMBG2136_1887) - 2016525..2016863 (-) 339 WP_002214902.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 34399.66 Da        Isoelectric Point: 10.0891

>NTDB_id=38787 NMBG2136_RS10485 WP_014580873.1 2011482..2012450(+) (ceuB) [Neisseria meningitidis G2136]
MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
VTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLGASLVLLCDIVGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAH
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=38787 NMBG2136_RS10485 WP_014580873.1 2011482..2012450(+) (ceuB) [Neisseria meningitidis G2136]
ATGACTGCCAAACCTTTTTCCCTCAACCTGACTAACCTCCTGCTGCTGGCGGTGTTGTTTGCCGTCAGCCTGTCGGTGGG
CGTTGCCGATTTCCGCTGGTCGGATGTGTTTTCGCTGTCGGACAGCCAGCAGGTTATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGTTGACGGGCGCGTCGATGGCGGTGGCGGGGATGATTATGCAGATTCTGATGCGTAACCGTTTTGTC
GAGCCTTCTATGGCGGGCGCGGGTCAGAGTGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCGCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGTTAATCGGGATGTTGGTGTTTATGATGCTTATCCGCCGCCTGCCGC
CGACGGCGCAACTGATGGTGCCTTTGGTCGGGATTATTTTCGGCGGCGTGGTTGAGGCGGTGGCCACCTTTATTGCGTAT
GAAAACGAAATGCTGCAAATGCTGGGCGTGTGGCAACAGGGCGATTTTTCGAGCGTGCTGCTGGGGCGGTACGAGCTGCT
TTGGATTACGGGCGGTTTGGCGGTGTTTGCCTATCTGATTGCCGACCGGCTGACGATTTTGGGGCTGGGCGAAACGGTCA
GCGTGAATTTGGGTTTGAACCGGACGGCGGTGTTGTGGTCGGGGCTGATTATTGTGGCTTTGATTACGTCGCTGGTTATC
GTTACGGTCGGCAATATTCCGTTTGTCGGGCTGGTCGTGCCGAACATCATCAGCCGCCTGATAGGCGACAGGCTGCGCCA
AAGCCTGCCTGCGGTGGCTTTGTTGGGCGCGTCTTTGGTGTTGCTGTGCGACATTGTCGGACGCGTGATTGTGTTTCCGT
TTGAAATTCCGGTCTCTACGGTTTTTGGTGTGTTGGGGACGGCGTTGTTTTTGTGGCTTTTATTAAGGAAACCTGCTCAT
GCCGTCTGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.196

93.478

0.385

Multiple sequence alignment