Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | FOB62_RS04530 | Genome accession | NZ_CP044102 |
| Coordinates | 916968..917921 (-) | Length | 317 a.a. |
| NCBI ID | WP_003060701.1 | Uniprot ID | A0A9X8T146 |
| Organism | Streptococcus dysgalactiae strain FDAARGOS_654 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 911968..922921
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB62_RS04505 (FOB62_04505) | proC | 913048..913824 (+) | 777 | WP_014611934.1 | pyrroline-5-carboxylate reductase | - |
| FOB62_RS04510 (FOB62_04510) | - | 913963..914400 (-) | 438 | WP_012766452.1 | hypothetical protein | - |
| FOB62_RS04515 (FOB62_04515) | - | 914418..915098 (-) | 681 | WP_012766451.1 | type II CAAX endopeptidase family protein | - |
| FOB62_RS04520 (FOB62_04520) | - | 915201..915407 (-) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| FOB62_RS04525 (FOB62_04525) | - | 915713..916909 (-) | 1197 | WP_003058485.1 | acetate kinase | - |
| FOB62_RS04530 (FOB62_04530) | comYH | 916968..917921 (-) | 954 | WP_003060701.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FOB62_RS04535 (FOB62_04535) | comGG | 917984..918358 (-) | 375 | WP_014611933.1 | competence type IV pilus minor pilin ComGG | - |
| FOB62_RS04540 (FOB62_04540) | comGF | 918336..918776 (-) | 441 | WP_003061780.1 | competence type IV pilus minor pilin ComGF | - |
| FOB62_RS04545 (FOB62_04545) | comGE | 918757..919002 (-) | 246 | WP_003058569.1 | competence type IV pilus minor pilin ComGE | - |
| FOB62_RS04550 (FOB62_04550) | comGD | 919010..919438 (-) | 429 | WP_014611932.1 | competence type IV pilus minor pilin ComGD | - |
| FOB62_RS04555 (FOB62_04555) | comYC | 919413..919739 (-) | 327 | WP_003055259.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FOB62_RS04560 (FOB62_04560) | comYB | 919741..920772 (-) | 1032 | WP_015057201.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FOB62_RS04565 (FOB62_04565) | comGA/cglA | 920708..921649 (-) | 942 | WP_014611930.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FOB62_RS04570 (FOB62_04570) | - | 921730..922095 (-) | 366 | WP_003055257.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36049.01 Da Isoelectric Point: 4.7910
>NTDB_id=387868 FOB62_RS04530 WP_003060701.1 916968..917921(-) (comYH) [Streptococcus dysgalactiae strain FDAARGOS_654]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=387868 FOB62_RS04530 WP_003060701.1 916968..917921(-) (comYH) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAGGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTTA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAGGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTTA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |