Detailed information NTG0387858

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FOB62_RS03240
• Genome accession: NZ_CP044102
• Coordinates: 646651..647574 (-)
• Length: 307 a.a.
• NCBI ID: WP_003057816.1
• Uniprot ID: A0A9X8T611
• Organism: Streptococcus dysgalactiae strain FDAARGOS_654
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 641651..652574

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB62_RS03235 (FOB62_03235)	-	645637..646623 (+)	987	WP_138127969.1	IS30-like element IS1239 family transposase	-
FOB62_RS03240 (FOB62_03240)	amiF	646651..647574 (-)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator
FOB62_RS03245 (FOB62_03245)	amiE	647567..648637 (-)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
FOB62_RS03250 (FOB62_03250)	amiD	648646..649572 (-)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
FOB62_RS03255 (FOB62_03255)	amiC	649572..651074 (-)	1503	WP_014612022.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34796.93 Da
• Isoelectric Point: 6.4058

>NTDB_id=387858 FOB62_RS03240 WP_003057816.1 646651..647574(-) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_654]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGDILYDGKVINRRKSKS
ESNELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELIVYNPEQHDYTEDKPTMVEIKPNHFVWANQAEVEKYKAEQ

Nucleotide

• Length: 924 bp

>NTDB_id=387858 FOB62_RS03240 WP_003057816.1 646651..647574(-) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGTCTGAGAAATTAGTCGAAGTTAAAGACCTAGAAATTTCCTTCGGAGAGGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCCAATTTCTTTATCAAAAAAGGTGAAACTTTCTCTTTAGTTGGAGAATCTGGAAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAATGATACCAGTTCTGGCGACATCCTTTATGATGGAAAAGTTATCAATCGAAGAAAGTCAAAATCA
GAATCAAATGAGCTCATTCGTAAGATTCAAATGATTTTCCAAGACCCTGCAGCTAGTCTGAATGAACGTGCAACTGTTGA
CTATATCATTTCAGAAGGTCTTTATAATTTTAATCTGTTCAAAACAGAAGAAGAGCGTAAGGAAAAGATTAAGAACATGA
TGGCCGAAGTTGGTTTGTTATCAGAACATTTGACTCGCTATCCTCACGAATTTTCAGGGGGCCAACGCCAGCGGATCGGT
ATCGCTAGAGCCCTAGTGATGAATCCCGAATTTGTCATTGCTGACGAACCTATCTCCGCTCTAGACGTTTCTGTTCGAGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGACTTACATATCTTTTCATCGCCCACGACCTATCAGTTG
TTCGTTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGTGTTATTGTGGAGGTTGCTGAAACAGAAGAACTGTTCAAT
AATCCTATCCACCCGTATACAAAATCTCTTTTATCAGCTGTTCCGATTCCAGATCCAATATTGGAACGTCAAAAAGAGCT
TATTGTCTATAACCCAGAGCAACATGACTATACAGAAGATAAACCAACGATGGTTGAAATTAAGCCAAATCACTTTGTGT
GGGCTAATCAAGCAGAAGTTGAAAAGTATAAAGCAGAACAATAA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.759	100	0.818
amiF	Streptococcus thermophilus LMD-9	81.433	100	0.814
amiF	Streptococcus salivarius strain HSISS4	81.433	100	0.814