Detailed information NTG0387802

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ53_RS00815
• Genome accession: NZ_CP051744
• Coordinates: 175432..176415 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-484
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 170432..181415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ53_RS00795 (HHJ53_00795)	dppA	171576..173183 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HHJ53_RS00800 (HHJ53_00800)	-	173245..173472 (-)	228	WP_000198576.1	hypothetical protein	-
HHJ53_RS00805 (HHJ53_00805)	dppB	173490..174509 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HHJ53_RS00810 (HHJ53_00810)	dppC	174519..175421 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ53_RS00815 (HHJ53_00815)	amiE	175432..176415 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ53_RS00820 (HHJ53_00820)	dppF	176412..177416 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ53_RS00825 (HHJ53_00825)	yhjV	177446..178717 (-)	1272	WP_001334058.1	aromatic amino acid transport family protein	-
HHJ53_RS00830 (HHJ53_00830)	ldrD	179193..179300 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ53_RS00835 (HHJ53_00835)	bcsG	179386..181065 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
HHJ53_RS00840 (HHJ53_00840)	bcsF	181062..181253 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=387802 HHJ53_RS00815 WP_001196477.1 175432..176415(+) (amiE) [Escherichia coli strain SCU-484]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=387802 HHJ53_RS00815 WP_001196477.1 175432..176415(+) (amiE) [Escherichia coli strain SCU-484]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTTGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404