Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FOB76_RS07420 Genome accession   NZ_CP044093
Coordinates   1428199..1429236 (+) Length   345 a.a.
NCBI ID   WP_002989068.1    Uniprot ID   Q1JKX2
Organism   Streptococcus pyogenes strain FDAARGOS_668     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1423199..1434236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB76_RS07395 (FOB76_07395) - 1423462..1424793 (+) 1332 WP_002989063.1 dipeptidase -
  FOB76_RS07400 (FOB76_07400) arcC 1424813..1425763 (+) 951 WP_002989065.1 carbamate kinase -
  FOB76_RS07405 (FOB76_07405) asnA 1426077..1427069 (+) 993 WP_002983817.1 aspartate--ammonia ligase -
  FOB76_RS07410 (FOB76_07410) rsmD 1427192..1427731 (+) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FOB76_RS07415 (FOB76_07415) coaD 1427721..1428212 (+) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  FOB76_RS07420 (FOB76_07420) sepM 1428199..1429236 (+) 1038 WP_002989068.1 SepM family pheromone-processing serine protease Regulator
  FOB76_RS07425 (FOB76_07425) - 1429641..1430618 (+) 978 WP_002989070.1 LacI family DNA-binding transcriptional regulator -
  FOB76_RS07430 (FOB76_07430) - 1431066..1431686 (+) 621 WP_032461520.1 YutD family protein -
  FOB76_RS07435 (FOB76_07435) rlmN 1431690..1432769 (+) 1080 WP_002989074.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  FOB76_RS07440 (FOB76_07440) - 1432851..1433477 (-) 627 WP_002989076.1 A24 family peptidase -
  FOB76_RS07445 (FOB76_07445) - 1433705..1434232 (+) 528 WP_002983837.1 Dps family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37527.17 Da        Isoelectric Point: 9.5788

>NTDB_id=387766 FOB76_RS07420 WP_002989068.1 1428199..1429236(+) (sepM) [Streptococcus pyogenes strain FDAARGOS_668]
MKRLNKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=387766 FOB76_RS07420 WP_002989068.1 1428199..1429236(+) (sepM) [Streptococcus pyogenes strain FDAARGOS_668]
ATGAAAAGACTTAACAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q1JKX2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69


Multiple sequence alignment