Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FOB76_RS04760 Genome accession   NZ_CP044093
Coordinates   890193..890906 (-) Length   237 a.a.
NCBI ID   WP_002991336.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_668     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 885193..895906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB76_RS09465 - 885353..885499 (+) 147 WP_002982210.1 hypothetical protein -
  FOB76_RS04725 (FOB76_04725) - 885528..886463 (+) 936 WP_002991347.1 Gfo/Idh/MocA family protein -
  FOB76_RS04730 (FOB76_04730) - 886472..886981 (+) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  FOB76_RS04735 (FOB76_04735) nrdG 886981..887595 (+) 615 WP_002991344.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FOB76_RS04740 (FOB76_04740) yaaA 887769..888500 (-) 732 WP_002991342.1 peroxide stress protein YaaA -
  FOB76_RS04745 (FOB76_04745) - 888542..889390 (-) 849 Protein_871 VOC family protein -
  FOB76_RS04750 (FOB76_04750) - 889576..889914 (+) 339 WP_002991339.1 helix-turn-helix domain-containing protein -
  FOB76_RS04760 (FOB76_04760) treR 890193..890906 (-) 714 WP_002991336.1 trehalose operon repressor Regulator
  FOB76_RS04765 (FOB76_04765) treP 891117..893141 (+) 2025 WP_002991333.1 PTS system trehalose-specific EIIBC component -
  FOB76_RS04770 (FOB76_04770) treC 893208..894836 (+) 1629 WP_002991331.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27608.78 Da        Isoelectric Point: 9.6226

>NTDB_id=387754 FOB76_RS04760 WP_002991336.1 890193..890906(-) (treR) [Streptococcus pyogenes strain FDAARGOS_668]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFSRRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=387754 FOB76_RS04760 WP_002991336.1 890193..890906(-) (treR) [Streptococcus pyogenes strain FDAARGOS_668]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTTCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment