Detailed information NTG0387733

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FOB76_RS02880
• Genome accession: NZ_CP044093
• Coordinates: 537330..538253 (-)
• Length: 307 a.a.
• NCBI ID: WP_002986000.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain FDAARGOS_668
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 532330..543253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB76_RS02875 (FOB76_02875)	-	537002..537181 (+)	180	WP_100215900.1	transposase	-
FOB76_RS09750	-	537208..537345 (+)	138	Protein_558	IS3 family transposase	-
FOB76_RS02880 (FOB76_02880)	amiF	537330..538253 (-)	924	WP_002986000.1	ABC transporter ATP-binding protein	Regulator
FOB76_RS02885 (FOB76_02885)	amiE	538246..539316 (-)	1071	WP_002986002.1	ABC transporter ATP-binding protein	Regulator
FOB76_RS02890 (FOB76_02890)	amiD	539325..540251 (-)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
FOB76_RS02895 (FOB76_02895)	amiC	540251..541753 (-)	1503	WP_002991105.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34715.90 Da
• Isoelectric Point: 6.5113

>NTDB_id=387733 FOB76_RS02880 WP_002986000.1 537330..538253(-) (amiF) [Streptococcus pyogenes strain FDAARGOS_668]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=387733 FOB76_RS02880 WP_002986000.1 537330..538253(-) (amiF) [Streptococcus pyogenes strain FDAARGOS_668]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAGTCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGCCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGAATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818