Detailed information NTG0387577

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ27_RS10855
• Genome accession: NZ_CP051733
• Coordinates: 2287622..2288608 (-)
• Length: 328 a.a.
• NCBI ID: WP_001595748.1
• Uniprot ID: -
• Organism: Escherichia coli strain SCU-109
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2282622..2293608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ27_RS10830 (HHJ27_10830)	maeA	2283563..2285260 (-)	1698	WP_000433462.1	malate dehydrogenase	-
HHJ27_RS10835 (HHJ27_10835)	sra	2285417..2285554 (-)	138	WP_000841554.1	stationary-phase-induced ribosome-associated protein	-
HHJ27_RS10840 (HHJ27_10840)	bdm	2285656..2285871 (-)	216	WP_001595746.1	biofilm-dependent modulation protein	-
HHJ27_RS10845 (HHJ27_10845)	osmC	2286216..2286647 (+)	432	WP_000152303.1	peroxiredoxin OsmC	-
HHJ27_RS10850 (HHJ27_10850)	ddpF	2286703..2287629 (-)	927	WP_001595747.1	ABC transporter ATP-binding protein	-
HHJ27_RS10855 (HHJ27_10855)	amiE	2287622..2288608 (-)	987	WP_001595748.1	ABC transporter ATP-binding protein	Regulator
HHJ27_RS10860 (HHJ27_10860)	ddpC	2288605..2289501 (-)	897	WP_001595749.1	D,D-dipeptide ABC transporter permease	-
HHJ27_RS10865 (HHJ27_10865)	ddpB	2289498..2290520 (-)	1023	WP_000145091.1	ABC transporter permease	-
HHJ27_RS10870 (HHJ27_10870)	ddpA	2290522..2292072 (-)	1551	WP_064770461.1	ABC transporter substrate-binding protein	-
HHJ27_RS10875 (HHJ27_10875)	ddpX	2292086..2292667 (-)	582	WP_001285826.1	D-alanyl-D-alanine dipeptidase	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 36083.87 Da
• Isoelectric Point: 7.6773

>NTDB_id=387577 HHJ27_RS10855 WP_001595748.1 2287622..2288608(-) (amiE) [Escherichia coli strain SCU-109]
MTHPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSYCVHRGHISLLGEDALK
AREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQPKSRREAKAKAIALLEEMQIPDAVEVMSRYPFELSGG
MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGV
TADVIHHPRHPYTIGLLQCAPEHGIPRQPLPAIPGTVPNLTHLPDGCAFRDRCYAAGTQCENVPALTACGDNNHRCACWY
PQQEVISV

Nucleotide

• Length: 987 bp

>NTDB_id=387577 HHJ27_RS10855 WP_001595748.1 2287622..2288608(-) (amiE) [Escherichia coli strain SCU-109]
ATGACCCACCCCGTTCTGGACATTCAACAGCTGCATTTGAGTTTCCCCGGTTTTAACGGCGACGTTCACGCGCTCAACAA
TGTGTCCTTGCAGATTAACCGCGGTGAAATTGTCGGTCTGGTGGGAGAATCCGGCTCGGGTAAATCAGTCACCGCAATGC
TGATTATGCGTCTGCTACCAACGGGCAGTTATTGCGTACATCGGGGACATATTTCACTGCTGGGAGAAGATGCTCTTAAA
GCTCGGGAAAAGCAGCTTCGTCAGTGGCGCGGCGCACGAGTGGCGATGATCTTTCAGGAACCGATGACCGCCCTTAATCC
GACACGTCGAATAGGTCTTCAGATGATGGACGTGATCCGCCATCATCAACCAAAAAGTCGTCGGGAAGCCAAAGCTAAAG
CGATTGCCCTGCTGGAAGAGATGCAAATCCCGGATGCCGTGGAAGTTATGTCGCGCTATCCGTTTGAGCTTTCAGGTGGT
ATGCGACAGCGGGTAATGATTGCGCTGGCATTCTCCTGCGAGCCGCAATTGATTATTGCCGACGAACCGACTACGGCGCT
GGACGTCACGGTACAGTTGCAGGTACTGCGTCTGCTTAAACATAAAGCCCGCGCCAGTGGAACTGCGGTACTGTTCATCA
GCCATGATATGGCCGTGGTGTCGCAACTGTGCGATAGCGTTTACGTGATGTATGCCGGAAGCGTGATCGAGAGCGGCGTG
ACGGCAGACGTTATCCATCATCCCCGGCATCCGTATACCATTGGTTTGCTGCAATGCGCACCGGAACATGGAATACCGCG
CCAGCCATTACCCGCCATTCCAGGGACGGTACCAAACCTCACCCATTTGCCTGACGGCTGCGCTTTTCGCGATCGTTGCT
ATGCGGCAGGTACACAGTGTGAAAACGTCCCGGCGCTGACAGCGTGTGGTGACAACAACCACCGCTGCGCCTGTTGGTAT
CCTCAGCAGGAGGTCATTAGTGTCTGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (25-184)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (236-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43	91.463	0.393
amiE	Streptococcus thermophilus LMG 18311	43	91.463	0.393
amiE	Streptococcus thermophilus LMD-9	43	91.463	0.393
oppD	Streptococcus mutans UA159	40.19	96.341	0.387