Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FOB49_RS11190 Genome accession   NZ_CP044083
Coordinates   2270698..2271321 (-) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain FDAARGOS_641     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2265698..2276321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB49_RS11175 (FOB49_11180) helD 2265933..2267987 (-) 2055 WP_015704911.1 DNA helicase IV -
  FOB49_RS11180 (FOB49_11185) - 2268111..2268557 (+) 447 WP_015704910.1 YccF domain-containing protein -
  FOB49_RS11185 (FOB49_11190) yccS 2268575..2270710 (+) 2136 WP_015367427.1 YccS family putative transporter -
  FOB49_RS11190 (FOB49_11195) sxy/tfoX 2270698..2271321 (-) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  FOB49_RS11195 (FOB49_11200) sulA 2271771..2272280 (+) 510 WP_015367430.1 SOS-induced cell division inhibitor SulA -
  FOB49_RS11200 (FOB49_11205) ompA 2272633..2273685 (+) 1053 WP_015704908.1 porin OmpA -
  FOB49_RS11205 (FOB49_11210) matP 2273777..2274229 (-) 453 WP_015367432.1 macrodomain Ter protein MatP -
  FOB49_RS11210 (FOB49_11215) - 2274415..2276172 (+) 1758 WP_015367433.1 AAA family ATPase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=387534 FOB49_RS11190 WP_026612357.1 2270698..2271321(-) (sxy/tfoX) [Klebsiella aerogenes strain FDAARGOS_641]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=387534 FOB49_RS11190 WP_026612357.1 2270698..2271321(-) (sxy/tfoX) [Klebsiella aerogenes strain FDAARGOS_641]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493

Multiple sequence alignment