Detailed information NTG0387467

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ28_RS00805
• Genome accession: NZ_CP051727
• Coordinates: 174805..175788 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-111
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 169805..180788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ28_RS00790 (HHJ28_00790)	dppA	170949..172556 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HHJ28_RS00795 (HHJ28_00795)	dppB	172863..173882 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HHJ28_RS00800 (HHJ28_00800)	dppC	173892..174794 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ28_RS00805 (HHJ28_00805)	amiE	174805..175788 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ28_RS00810 (HHJ28_00810)	dppF	175785..176789 (+)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ28_RS00815 (HHJ28_00815)	yhjV	176819..178090 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
HHJ28_RS00820 (HHJ28_00820)	-	178566..178673 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ28_RS00825 (HHJ28_00825)	-	179049..179156 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ28_RS00830 (HHJ28_00830)	-	179532..179639 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=387467 HHJ28_RS00805 WP_001196477.1 174805..175788(+) (amiE) [Escherichia coli strain SCU-111]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=387467 HHJ28_RS00805 WP_001196477.1 174805..175788(+) (amiE) [Escherichia coli strain SCU-111]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404