Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | FOB70_RS25340 | Genome accession | NZ_CP044071 |
| Coordinates | 3250361..3250879 (+) | Length | 172 a.a. |
| NCBI ID | WP_005462534.1 | Uniprot ID | Q87LS4 |
| Organism | Vibrio parahaemolyticus strain FDAARGOS_662 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3245361..3255879
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB70_RS25330 (FOB70_25330) | gshA | 3248096..3249664 (+) | 1569 | WP_005493959.1 | glutamate--cysteine ligase | - |
| FOB70_RS25335 (FOB70_25335) | - | 3249689..3250294 (+) | 606 | WP_015297256.1 | hypothetical protein | - |
| FOB70_RS25340 (FOB70_25340) | luxS | 3250361..3250879 (+) | 519 | WP_005462534.1 | S-ribosylhomocysteine lyase | Regulator |
| FOB70_RS25345 (FOB70_25345) | - | 3250941..3252221 (-) | 1281 | WP_005462557.1 | HlyC/CorC family transporter | - |
| FOB70_RS25350 (FOB70_25350) | - | 3252347..3253141 (-) | 795 | WP_005462565.1 | inner membrane protein YpjD | - |
| FOB70_RS25355 (FOB70_25355) | ffh | 3253354..3254736 (+) | 1383 | WP_005462555.1 | signal recognition particle protein | - |
| FOB70_RS25360 (FOB70_25360) | rpsP | 3254946..3255194 (+) | 249 | WP_005379962.1 | 30S ribosomal protein S16 | - |
| FOB70_RS25365 (FOB70_25365) | rimM | 3255223..3255771 (+) | 549 | WP_005462552.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19033.73 Da Isoelectric Point: 4.7134
>NTDB_id=387445 FOB70_RS25340 WP_005462534.1 3250361..3250879(+) (luxS) [Vibrio parahaemolyticus strain FDAARGOS_662]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
Nucleotide
Download Length: 519 bp
>NTDB_id=387445 FOB70_RS25340 WP_005462534.1 3250361..3250879(+) (luxS) [Vibrio parahaemolyticus strain FDAARGOS_662]
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
88.889 |
99.419 |
0.884 |